RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TNXAQ16473 311 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 VMA21Q3ZAQ7 101 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 FAM223AQ8IWN6 122 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 TEX45Q8NA69 505 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 ADAD2Q8NCV1 583 aaKnown RBP8.22□□□□□ -1.09
CDRT1-205ENST00000475944 OR10J5Q8NHC4 309 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 UFD1Q92890 307 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 CABLES2Q9BTV7 478 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 SLC2A8Q9NY64 477 aa8.22□□□□□ -1.09
CDRT1-205ENST00000475944 LSM2Q9Y333 95 aaKnown RBP8.22□□□□□ -1.09
CDRT1-205ENST00000475944 AK6Q9Y3D8 172 aaKnown RBP8.22□□□□□ -1.09
CDRT1-205ENST00000475944 RBM7Q9Y580 266 aaKnown RBP8.22□□□□□ -1.09
CDRT1-205ENST00000475944 SRRM4A7MD48 611 aaKnown RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 PTGES3LE9PB15 166 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 EBAG9O00559 213 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 DENRO43583 198 aaKnown RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 CREBL2O60519 120 aaPredicted RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 TUSC2O75896 110 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 FCGR3AP08637 254 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 MECP2P51608 486 aaKnown RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 UBE2KP61086 200 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 EXOSC2Q13868 293 aaKnown RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 RCN1Q15293 331 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 TRAM1Q15629 374 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 PRSS8Q16651 343 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 IGSF11Q5DX21 431 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 PLAC9Q5JTB6 97 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 FAM209BQ5JX69 171 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 LIPKQ5VXJ0 399 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 DYNLRB2Q8TF09 96 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.1
CDRT1-205ENST00000475944 TMEM203Q969S6 136 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 FAM3DQ96BQ1 224 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 ADTRPQ96IZ2 230 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 GFI1Q99684 422 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 NEURL2Q9BR09 285 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 VCXQ9H320 206 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 RETNQ9HD89 108 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 SCN3BQ9NY72 215 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.1
CDRT1-205ENST00000475944 DNAH1Q9P2D7 4330 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 TRBV6-7A0A0A0MS04 114 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 BMPR1BO00238 502 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 RBMXL2O75526 392 aaKnown RBP8.2□□□□□ -1.1
CDRT1-205ENST00000475944 ACTL6BO94805 426 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 CRYZL1O95825 349 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 PSMA1P25786 263 aaKnown RBP8.2□□□□□ -1.1
CDRT1-205ENST00000475944 CLDN12P56749 244 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 RHOGP84095 191 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 ATP5G2Q06055 141 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 C2orf76Q3KRA6 126 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 CD300EQ496F6 205 aaPredicted RBP8.2□□□□□ -1.1
CDRT1-205ENST00000475944 TMEM91Q6ZNR0 172 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 ACOT12Q8WYK0 555 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
CDRT1-205ENST00000475944 RAB3CQ96E17 227 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 FAM110AQ9BQ89 295 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 GINS4Q9BRT9 223 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 CENPOQ9BU64 300 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 AKIP1Q9NQ31 210 aa8.2□□□□□ -1.1
CDRT1-205ENST00000475944 ZNF230Q9UIE0 474 aaPredicted RBP8.2□□□□□ -1.1
CDRT1-205ENST00000475944 TRBV9A0A0B4J1U6 114 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 CD7P09564 240 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 GSTT2P0CG29 244 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 GSTT2BP0CG30 244 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 HSMCR30P0CW71 290 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 GADD45AP24522 165 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
CDRT1-205ENST00000475944 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
CDRT1-205ENST00000475944 PSMD7P51665 324 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 RPS25P62851 125 aaKnown RBP8.19□□□□□ -1.1
CDRT1-205ENST00000475944 MRGPRG-AS1Q2M3A8 158 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 OGFRL1Q5TC84 451 aaPredicted RBP8.19□□□□□ -1.1
CDRT1-205ENST00000475944 IDO2Q6ZQW0 420 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 SLC25A42Q86VD7 318 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 OSR1Q8TAX0 266 aaPredicted RBP8.19□□□□□ -1.1
CDRT1-205ENST00000475944 DDB2Q92466 427 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 C5orf30Q96GV9 206 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 RAB22AQ9UL26 194 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 KCNK7Q9Y2U2 307 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 V9GY05 133 aa8.19□□□□□ -1.1
CDRT1-205ENST00000475944 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.18□□□□□ -1.1
CDRT1-205ENST00000475944 TMEM272A0A1B0GTI8 110 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 ZNF785A8K8V0 405 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 OR11H12B2RN74 326 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 CASQ2O14958 399 aaPredicted RBP8.18□□□□□ -1.1
CDRT1-205ENST00000475944 PRH1P02810 166 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 IRF3Q14653 427 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 CDK10Q15131 360 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 GUCA2BQ16661 112 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 DEFB114Q30KQ6 69 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 MMD2Q8IY49 270 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 NECAP1Q8NC96 275 aa8.18□□□□□ -1.1
CDRT1-205ENST00000475944 OR10R2Q8NGX6 335 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms