RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 KHDC3LQ587J8 217 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 TRAT1Q6PIZ9 186 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 ABHD17AQ96GS6 310 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 IFI27L2Q9H2X8 130 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 JPT1Q9UK76 154 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 KLF2Q9Y5W3 355 aaPredicted RBP11.66□□□□□ -0.54
UBXN11-214ENST00000475591 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 OR2C1O95371 312 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 BCL2P10415 239 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 FGF7P21781 194 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 TAGLN2P37802 199 aaKnown RBP11.66□□□□□ -0.54
UBXN11-214ENST00000475591 SERF2P84101 59 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 C17orf58Q2M2W7 97 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 MBD3L1Q8WWY6 194 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 SNRNP40Q96DI7 357 aaKnown RBP11.66□□□□□ -0.54
UBXN11-214ENST00000475591 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 TUBA4BQ9H853 241 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 MUC6Q6W4X9 2439 aa11.66□□□□□ -0.54
UBXN11-214ENST00000475591 RAB5AP20339 215 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 CD40P25942 277 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 RAB5BP61020 215 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 SNRPEP62304 92 aaKnown RBP11.65□□□□□ -0.54
UBXN11-214ENST00000475591 TNFAIP6P98066 277 aaPredicted RBP11.65□□□□□ -0.54
UBXN11-214ENST00000475591 ADAM5Q6NVV9 412 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 ZNF343Q6P1L6 599 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 ZCCHC24Q8N2G6 241 aaKnown RBP11.65□□□□□ -0.54
UBXN11-214ENST00000475591 TMPRSS5Q9H3S3 457 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 SLC25A22Q9H936 323 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 TP53TG5Q9Y2B4 290 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 A0A0G2JNJ9 132 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 YPEL1O60688 119 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 EIF2S3LQ2VIR3 472 aaKnown RBP11.65□□□□□ -0.54
UBXN11-214ENST00000475591 CR1LQ2VPA4 569 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 DOLPP1Q86YN1 238 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 CISD2Q8N5K1 135 aaKnown RBP11.65□□□□□ -0.54
UBXN11-214ENST00000475591 OR10P1Q8NGE3 313 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 YPEL2Q96QA6 119 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 CCL13Q99616 98 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 Q9UFV3 132 aa11.65□□□□□ -0.54
UBXN11-214ENST00000475591 RAI1Q7Z5J4 1906 aaPredicted RBP11.65□□□□□ -0.55
UBXN11-214ENST00000475591 F2RL2O00254 374 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 IFNA17P01571 189 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 GYPAP02724 150 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 TCTEX1D1Q8N7M0 179 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 NIPSNAP3BQ9BS92 247 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 PARD6GQ9BYG4 376 aaPredicted RBP11.64□□□□□ -0.55
UBXN11-214ENST00000475591 UNKLQ9H9P5 680 aaKnown RBP11.64□□□□□ -0.55
UBXN11-214ENST00000475591 URGCP-MRPS24S4R325 110 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 C15orf62A8K5M9 175 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 CGB3P0DN86 165 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 CGB7P0DN87 165 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 PRAMEF5Q5TYX0 476 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 CISD1Q9NZ45 108 aaKnown RBP11.64□□□□□ -0.55
UBXN11-214ENST00000475591 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 LAMP3Q9UQV4 416 aa11.64□□□□□ -0.55
UBXN11-214ENST00000475591 NBL1P41271 181 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 ERVFRD-1P60508 538 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 CCL8P80075 99 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 CT45A1Q5HYN5 189 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 WFDC8Q8IUA0 241 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 CT45A3Q8NHU0 189 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 CA5BP1Q8WTZ4 195 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 GATAD1Q8WUU5 269 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 LHX4Q969G2 390 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 TVP23CQ96ET8 276 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 SLC39A9Q9NUM3 307 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 OR6C3Q9NZP0 311 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 HCFC1P51610 2035 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 MMP23AO75900 390 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 HPRT1P00492 218 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 AGAP20933 346 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 GATA4P43694 442 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 RNF212Q495C1 297 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 KRTCAP3Q53RY4 240 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 FFAR4Q5NUL3 377 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 STUMQ69YW2 141 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 PINX1Q96BK5 328 aaKnown RBP11.63□□□□□ -0.55
UBXN11-214ENST00000475591 GAFA1Q96PS6 74 aa11.63□□□□□ -0.55
UBXN11-214ENST00000475591 MKRN2OSH3BPM6 223 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 HOXA1P49639 335 aaPredicted RBP11.62□□□□□ -0.55
UBXN11-214ENST00000475591 GNG10P50151 68 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 TDGF1P3P51864 188 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 PRR30Q53SZ7 412 aaPredicted RBP11.62□□□□□ -0.55
UBXN11-214ENST00000475591 Q8NA96 180 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 FAM222BQ8WU58 562 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 NPCDR1Q9BY65 106 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms