RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 LYG1Q8N1E2 194 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF555Q8NEP9 628 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR5D13Q8NGL4 314 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 HAVCR2Q8TDQ0 301 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 CCDC107Q8WV48 283 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 TOMM40LQ969M1 308 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR5B12Q96R08 314 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 FAM234AQ9H0X4 552 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 MED28Q9H204 178 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 HHLA2Q9UM44 414 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 FAM96BQ9Y3D0 163 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 CYB5AP00167 134 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 MT-CO2P00403 227 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 IGHA1P01876 353 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 RAB6AP20340 208 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 PPT1P50897 306 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 ATP1B3P54709 279 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 RPL15P61313 204 aaKnown RBP9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 STEAP1BQ6NZ63 245 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 MRPL41Q8IXM3 137 aaKnown RBP9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 Q8IYB0 196 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 CD177Q8N6Q3 437 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 Q8N7P7 452 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 FAM46BQ96A09 425 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 PELI1Q96FA3 418 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 CXorf58Q96LI9 332 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 MRPS18AQ9NVS2 196 aaKnown RBP9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 STEAP1Q9UHE8 339 aa9.42□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZBTB25P24278 435 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 GLP1RP43220 463 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 UBE2E1P51965 193 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 RAG2P55895 527 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 RPL31P62899 125 aaKnown RBP9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 SLC25A26Q70HW3 274 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 MKXQ8IYA7 352 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF676Q8N7Q3 588 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 FGGYQ96C11 551 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ADAT3Q96EY9 351 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 PRO1933Q9H354 126 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ELL3Q9HB65 397 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 AMBNQ9NP70 447 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ERVK13-1Q9NX77 482 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 RNF150Q9ULK6 438 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 SF3B6Q9Y3B4 125 aaKnown RBP9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 WNK2Q9Y3S1 2297 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 IGKV1-27A0A075B6S5 117 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 A0A1B0GUS0 222 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 IRGMA1A4Y4 181 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR4C45A6NMZ5 311 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 NPFFO15130 113 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 CCL25O15444 150 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 SOX15O60248 233 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 TK1P04183 234 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ARG1P05089 322 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 CHRM2P08172 466 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR5AC1P0C628 307 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR8U9P0C7N5 309 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 ATF1P18846 271 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 AZGP1P25311 298 aaKnown RBP9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 MTCP1P56278 107 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 POU2AF1Q16633 256 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 AWAT2Q6E213 333 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 CBLN2Q8IUK8 224 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 LAX1Q8IWV1 398 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 LGI3Q8N145 548 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 C11orf42Q8N5U0 333 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 DYRK2Q92630 601 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 FLVCR2Q9UPI3 526 aa9.41□□□□□ -0.9
HLA-DOB-208ENST00000475235 IGKV1-9A0A0C4DH69 117 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 TMEM212A6NML5 194 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 K7N7A8 449 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 MMP23AO75900 390 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 SLC2A2P11168 524 aaPredicted RBP9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 S100GP29377 79 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 IER3P46695 156 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 RAB7AP51149 207 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 MXD1Q05195 221 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR5I1Q13606 314 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 RAB32Q13637 225 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 TMEM88Q6PEY1 159 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF664Q8N3J9 261 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 SAMD12Q8N8I0 201 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR52I1Q8NGK6 324 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR4D5Q8NGN0 318 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR4F5Q8NH21 305 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 CFHR4Q92496 578 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 EMG1Q92979 244 aaKnown RBP9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 CHIAQ9BZP6 476 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 MMP28Q9H239 520 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms