RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 OR2B11Q5JQS5 317 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 NPBQ8NG41 125 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 FLYWCH2Q96CP2 140 aaKnown RBP12.5□□□□□ -0.41
COL1A1-204ENST00000474644 SDHCQ99643 169 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-204ENST00000474644 RNF5Q99942 180 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 RSRP1Q9BUV0 290 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 PRELID3BQ9Y3B1 194 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 GPR31O00270 319 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 FCGR3BO75015 233 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 CRYZL1O95825 349 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 RLN1P04808 185 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 AP3S2P59780 193 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
COL1A1-204ENST00000474644 BAK1Q16611 211 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 ARSJQ5FYB0 599 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-204ENST00000474644 C9orf152Q5JTZ5 239 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 SLC38A6Q8IZM9 456 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 TOMM5Q8N4H5 51 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 TERB2Q8NHR7 220 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 MRGPRFQ96AM1 343 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 RASL11BQ9BPW5 248 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 SERTAD4Q9NUC0 356 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 KIAA1456Q9P272 454 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 RNF114Q9Y508 228 aa12.49□□□□□ -0.41
COL1A1-204ENST00000474644 TENM1Q9UKZ4 2725 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 RRHO14718 337 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 SPDEFO95238 335 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 IGLV2-23P01705 113 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 PGAM2P15259 253 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 VDAC2P45880 294 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-204ENST00000474644 PROK1P58294 105 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 CATR1Q13166 79 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 PSG5Q15238 335 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 C5orf64Q2M2E5 130 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 PHLDA2Q53GA4 152 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 C12orf54Q6X4T0 127 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 CMTM1Q8IZ96 169 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 OR51S1Q8NGJ8 323 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 TSNAXQ99598 290 aaKnown RBP12.48□□□□□ -0.41
COL1A1-204ENST00000474644 PRRT1Q99946 306 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 SLC2A8Q9NY64 477 aa12.48□□□□□ -0.41
COL1A1-204ENST00000474644 SHOXO15266 292 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 PGLYRP1O75594 196 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-204ENST00000474644 FAUP35544 74 aaKnown RBP12.47□□□□□ -0.41
COL1A1-204ENST00000474644 KIR2DS2P43631 304 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 LGALS7P47929 136 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 IDO2Q6ZQW0 420 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 OR13C8Q8NGS7 320 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 OR4S2Q8NH73 311 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 OSR1Q8TAX0 266 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-204ENST00000474644 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 DEDD2Q8WXF8 326 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 HSPB9Q9BQS6 159 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 HRASLSQ9HDD0 168 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 SLC2A9Q9NRM0 540 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
COL1A1-204ENST00000474644 METTL1Q9UBP6 276 aaKnown RBP12.47□□□□□ -0.41
COL1A1-204ENST00000474644 SLC25A17O43808 307 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 RAMP3O60896 148 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 IGHG2P01859 326 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 IL7P13232 177 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 PI3P19957 117 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 INPP1P49441 399 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 PLGLAQ15195 96 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 ZNF57Q68EA5 555 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-204ENST00000474644 SLC35E3Q7Z769 313 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 SPAG16Q8N0X2 631 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 KLHDC1Q8N7A1 406 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 S100ZQ8WXG8 99 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 ZNF486Q96H40 463 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-204ENST00000474644 TPSG1Q9NRR2 321 aa12.46□□□□□ -0.41
COL1A1-204ENST00000474644 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
COL1A1-204ENST00000474644 HAX1O00165 279 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 RBFOX2O43251 390 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL1A1-204ENST00000474644 VSIG10L2P0DP72 767 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 S100GP29377 79 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 ECI1P42126 302 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 RND3P61587 244 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 SURF2Q15527 256 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-204ENST00000474644 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 TBC1D26Q86UD7 250 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 SCP2D1Q9UJQ7 156 aa12.45□□□□□ -0.42
COL1A1-204ENST00000474644 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 LINC01548A6NM66 108 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 KCNAB3O43448 404 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 CRYGBP07316 175 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 CTSDP07339 412 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-204ENST00000474644 SAA1P0DJI8 122 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-204ENST00000474644 PIGPP57054 158 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms