RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 OR5M8Q8NGP6 311 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 SMIM4Q8WVI0 70 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 RBMXL1Q96E39 390 aaKnown RBP11.89□□□□□ -0.51
VARS-223ENST00000474643 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 ABHD1Q96SE0 405 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 TOLLIPQ9H0E2 274 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 WASHC3Q9Y3C0 194 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 DNAH3Q8TD57 4116 aa11.89□□□□□ -0.51
VARS-223ENST00000474643 WI2-2373I1.2A0A1W2PRP0 233 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 LINC01548A6NM66 108 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 K7EIL1 84 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 ELANEP08246 267 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 LUMP51884 338 aaPredicted RBP11.88□□□□□ -0.51
VARS-223ENST00000474643 F2RL1P55085 397 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 CBX3Q13185 183 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 PLGLAQ15195 96 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 DEFB136Q30KP8 78 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 Q8N6K4 173 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 FCAMRQ8WWV6 532 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 PARP11Q9NR21 331 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 TAS2R8Q9NYW2 309 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 MTFP1Q9UDX5 166 aa11.88□□□□□ -0.51
VARS-223ENST00000474643 RBMX2Q9Y388 322 aaKnown RBP11.88□□□□□ -0.51
VARS-223ENST00000474643 NBR2O15453 112 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 TBPP20226 339 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 RCVRNP35243 200 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 DGCR2P98153 550 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 ABHD5Q8WTS1 349 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 HSPB9Q9BQS6 159 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 AKIP1Q9NQ31 210 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 SDHAF2Q9NX18 166 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 OR2W1Q9Y3N9 320 aa11.87□□□□□ -0.51
VARS-223ENST00000474643 H0YJW9 148 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 RBBP9O75884 186 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 CNTFRP26992 372 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 CD40LGP29965 261 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
VARS-223ENST00000474643 VAX1Q5SQQ9 334 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 MFSD4AQ8N468 514 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 FAM71E2Q8N5Q1 922 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 RAX2Q96IS3 184 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 WDR12Q9GZL7 423 aaKnown RBP11.86□□□□□ -0.51
VARS-223ENST00000474643 PLSCR3Q9NRY6 295 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
VARS-223ENST00000474643 SLC22A5O76082 557 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 FCGR2CP31995 323 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 CDX1P47902 265 aaPredicted RBP11.85□□□□□ -0.51
VARS-223ENST00000474643 TAS2R46P59540 309 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 EGFEM1PQ0D2K5 195 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 CDK10Q15131 360 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 ZNF79Q15937 498 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 ACTBL2Q562R1 376 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 C9orf66Q5T8R8 295 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 PDPNQ86YL7 162 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 Q8N402 240 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 OR5AN1Q8NGI8 311 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 OR5H2Q8NGV7 314 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 C4orf3Q8WVX3 66 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 RITA1Q96K30 269 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 P2RX4Q99571 388 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 CCDC32Q9BV29 185 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 WSB1Q9Y6I7 421 aa11.85□□□□□ -0.51
VARS-223ENST00000474643 SEC14L6B5MCN3 397 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 RAMP3O60896 148 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 PROP1O75360 226 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 TUSC2O75896 110 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 IGHG4P01861 327 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 PPP5CP53041 499 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 LINC00205P59089 165 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 FXYD4P59646 89 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 AP3S2P59780 193 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 ZNF846Q147U1 533 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 RTL8BQ17RB0 113 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 RNASE12Q5GAN4 147 aaKnown RBP11.84□□□□□ -0.51
VARS-223ENST00000474643 OR52I2Q8NH67 350 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 SECTM1Q8WVN6 248 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
VARS-223ENST00000474643 ADTRPQ96IZ2 230 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 TSNAXQ99598 290 aaKnown RBP11.84□□□□□ -0.51
VARS-223ENST00000474643 SRRQ9GZT4 340 aa11.84□□□□□ -0.51
VARS-223ENST00000474643 LY86O95711 162 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 PMP2P02689 132 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 IGF1P05019 195 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 AADACP22760 399 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 HERV-K104P61576 105 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 TAGLNQ01995 201 aaKnown RBP11.83□□□□□ -0.52
VARS-223ENST00000474643 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 C5orf64Q2M2E5 130 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 PYDC2Q56P42 97 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 LIN54Q6MZP7 749 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms