RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CCL24O00175 119 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 ARPC1BO15143 372 aaKnown RBP12.48□□□□□ -0.41
ITGB1-210ENST00000474568 SOX15O60248 233 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 FCGR3BO75015 233 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 CNIH1O95406 144 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-210ENST00000474568 LGALS7P47929 136 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 FXYD4P59646 89 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 FXYD3Q14802 87 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 TMEM177Q53S58 311 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 KPRPQ5T749 579 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-210ENST00000474568 FOXB2Q5VYV0 432 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 KCTD9Q7L273 389 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 MINDY2Q8NBR6 621 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
ITGB1-210ENST00000474568 ADTRPQ96IZ2 230 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 NECAP2Q9NVZ3 263 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 FOXA2Q9Y261 457 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-210ENST00000474568 NUBP2Q9Y5Y2 271 aa12.48□□□□□ -0.41
ITGB1-210ENST00000474568 TNFSF12O43508 249 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 HPGDSO60760 199 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 GABARAPO95166 117 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 IGLV1-40P01703 118 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 IGLV2-14P01704 120 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 RRASP10301 218 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 CBX5P45973 191 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 RAB9AP51151 201 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 RORCP51449 518 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 TAGLNQ01995 201 aaKnown RBP12.47□□□□□ -0.41
ITGB1-210ENST00000474568 CTF1Q16619 201 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 ACTBL2Q562R1 376 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 C19orf54Q5BKX5 351 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 GPR141Q7Z602 305 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 ZNF491Q8N8L2 437 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 TCTEX1D2Q8WW35 142 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 RCC1LQ96I51 464 aaKnown RBP12.47□□□□□ -0.41
ITGB1-210ENST00000474568 MS4A10Q96PG2 267 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 P2RX4Q99571 388 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 DNAH3Q8TD57 4116 aa12.47□□□□□ -0.41
ITGB1-210ENST00000474568 PPYP01298 95 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 PMP2P02689 132 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 CRYGBP07316 175 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 SLC6A1P30531 599 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 HOXD3P31249 432 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-210ENST00000474568 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-210ENST00000474568 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-210ENST00000474568 TMEM267Q0VDI3 215 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-210ENST00000474568 KIAA0141Q14154 515 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-210ENST00000474568 CDK10Q15131 360 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 SNX29P2Q8IUI4 249 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 OR5AP2Q8NGF4 316 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 ALX4Q9H161 411 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-210ENST00000474568 EHFQ9NZC4 300 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 VSIG4Q9Y279 399 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 PRELID3BQ9Y3B1 194 aa12.46□□□□□ -0.41
ITGB1-210ENST00000474568 FAM25AB3EWG3 89 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 FAM25CB3EWG5 89 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 FAM25GB3EWG6 89 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 SLC22A5O76082 557 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 APELAP0DMC3 54 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 ELK1P19419 428 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 PRSS3P35030 304 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 ALDH3B2P48448 385 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 RNASE12Q5GAN4 147 aaKnown RBP12.45□□□□□ -0.42
ITGB1-210ENST00000474568 TMEM17Q86X19 198 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 OR5T1Q8NG75 326 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 OR11H1Q8NG94 326 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 MYOZ3Q8TDC0 251 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 SLC5A7Q9GZV3 580 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 ZNF355PQ9NSJ1 428 aa12.45□□□□□ -0.42
ITGB1-210ENST00000474568 AURKAIP1Q9NWT8 199 aaPredicted RBP12.45□□□□□ -0.42
ITGB1-210ENST00000474568 SMIM31A0A1B0GVY4 71 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 IGHV3-11P01762 117 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 APOA1P02647 267 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 RFX2P48378 723 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 UBE2KP61086 200 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 TNXAQ16473 311 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 CLVS1Q8IUQ0 354 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-210ENST00000474568 VKORC1L1Q8N0U8 176 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 MFSD4AQ8N468 514 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 TCTEX1D1Q8N7M0 179 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 ACOT12Q8WYK0 555 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 UBE2E2Q96LR5 201 aa12.44□□□□□ -0.42
ITGB1-210ENST00000474568 SAA1P0DJI8 122 aaPredicted RBP12.43□□□□□ -0.42
ITGB1-210ENST00000474568 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
ITGB1-210ENST00000474568 TPPP2P59282 170 aa12.43□□□□□ -0.42
ITGB1-210ENST00000474568 HERV-K104P61576 105 aa12.43□□□□□ -0.42
ITGB1-210ENST00000474568 DEFA5Q01523 94 aa12.43□□□□□ -0.42
ITGB1-210ENST00000474568 EIF4EBP1Q13541 118 aaPredicted RBP12.43□□□□□ -0.42
ITGB1-210ENST00000474568 SPCS2Q15005 226 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms