RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.63
VAMP4-203ENST00000474047 TCTEX1D2Q8WW35 142 aa11.15□□□□□ -0.63
VAMP4-203ENST00000474047 SNAPC3Q92966 411 aa11.15□□□□□ -0.63
VAMP4-203ENST00000474047 SLC5A7Q9GZV3 580 aa11.15□□□□□ -0.63
VAMP4-203ENST00000474047 VWFP04275 2813 aa11.15□□□□□ -0.63
VAMP4-203ENST00000474047 A0A1W2PN81 502 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 PPYP01298 95 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 PMP2P02689 132 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 CHRNA7P36544 502 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 CFHR3Q02985 330 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 FXYD3Q14802 87 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 UNQ5815/PRO19632Q6UWF5 114 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 ARPC1AQ92747 370 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 CCL28Q9NRJ3 127 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 TAS2R8Q9NYW2 309 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
VAMP4-203ENST00000474047 G3V4G9 280 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 RGS5O15539 181 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-203ENST00000474047 RFX2P48378 723 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 TMBIM6P55061 237 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-203ENST00000474047 GIMAP1Q8WWP7 306 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 DDB2Q92466 427 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
VAMP4-203ENST00000474047 SCPEP1Q9HB40 452 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 TPSG1Q9NRR2 321 aa11.13□□□□□ -0.63
VAMP4-203ENST00000474047 FOXA2Q9Y261 457 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-203ENST00000474047 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 PSMB8P28062 276 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 MYCNOSP40205 109 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 RAB25P57735 213 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 NDPQ00604 133 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 SPCS2Q15005 226 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 ACTBL2Q562R1 376 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 TMEM17Q86X19 198 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 MFSD4AQ8N468 514 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 LFNGQ8NES3 379 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 OR4S2Q8NH73 311 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 BORCS5Q969J3 196 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 SCOCQ9UIL1 159 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 TNFSF12O43508 249 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 HLA-DMAP28067 261 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
VAMP4-203ENST00000474047 TSPAN5P62079 268 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 TEX45Q8NA69 505 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 OR6F1Q8NGZ6 308 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 PHB2Q99623 299 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 BCL7BQ9BQE9 202 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 ZNF2Q9BSG1 426 aaPredicted RBP11.12□□□□□ -0.63
VAMP4-203ENST00000474047 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 EXTL2Q9UBQ6 330 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 ADAM30Q9UKF2 790 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 FBXO7Q9Y3I1 522 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 NUBP2Q9Y5Y2 271 aa11.12□□□□□ -0.63
VAMP4-203ENST00000474047 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
VAMP4-203ENST00000474047 CCL24O00175 119 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 SULT1C2O00338 296 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 CREBL2O60519 120 aaPredicted RBP11.11□□□□□ -0.63
VAMP4-203ENST00000474047 ACTL6BO94805 426 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 IGLV2-14P01704 120 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 NAT1P18440 290 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 KIR2DS2P43631 304 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 RAB9AP51151 201 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 UBE2KP61086 200 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
VAMP4-203ENST00000474047 PJVKQ0ZLH3 352 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 CATR1Q13166 79 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 DYRK1AQ13627 763 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 MSMO1Q15800 293 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 TNXAQ16473 311 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 AKIRIN2Q53H80 203 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
VAMP4-203ENST00000474047 OVCH2Q7RTZ1 564 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 MINDY2Q8NBR6 621 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 OR5M8Q8NGP6 311 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 C15orf40Q8WUR7 153 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 DUX3Q96PT4 197 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 KLK15Q9H2R5 256 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
VAMP4-203ENST00000474047 IGLV1-40P01703 118 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 EGR2P11161 476 aaPredicted RBP11.1□□□□□ -0.63
VAMP4-203ENST00000474047 IGLL1P15814 213 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 RCVRNP35243 200 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 HRH1P35367 487 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
VAMP4-203ENST00000474047 DEFB136Q30KP8 78 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 SAMD5Q5TGI4 173 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 PYHIN1Q6K0P9 492 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 DHRS11Q6UWP2 260 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms