RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SHOXO15266 292 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 TCTAP57738 103 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 TNXAQ16473 311 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 PRSS8Q16651 343 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 YIF1BQ5BJH7 314 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 OR2G6Q5TZ20 316 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 STPG3Q8N7X2 389 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 OR1L6Q8NGR2 347 aa14.07□□□□□ -0.16
SORT1-203ENST00000471996 RPL36Q9Y3U8 105 aaKnown RBP14.07□□□□□ -0.16
SORT1-203ENST00000471996 TRBV6-6A0A0A6YYG2 114 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 TRAV25A0A0B4J276 109 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 OR2J3O76001 311 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 IFNA4P05014 189 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 ETV1P50549 477 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 HLA-DRB3P79483 266 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 TMEM177Q53S58 311 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 BTNL8Q6UX41 500 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 TMPRSS11AQ6ZMR5 421 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 TTC9CQ8N5M4 171 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.06□□□□□ -0.16
SORT1-203ENST00000471996 UQCC2Q9BRT2 126 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 KRTAP4-5Q9BYR2 181 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 FGF20Q9NP95 211 aaPredicted RBP14.06□□□□□ -0.16
SORT1-203ENST00000471996 BABAM2Q9NXR7 383 aa14.06□□□□□ -0.16
SORT1-203ENST00000471996 ZNF320A2RRD8 509 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 A8MWP6 167 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 LALBAP00709 142 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 HTR2CP28335 458 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 NANOS2P60321 138 aaKnown RBP14.05□□□□□ -0.16
SORT1-203ENST00000471996 FAM106AQ4KMX7 169 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 ZFP1Q6P2D0 407 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 OR2C3Q8N628 320 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 TEX45Q8NA69 505 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 FBLIM1Q8WUP2 373 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 MFFQ9GZY8 342 aa14.05□□□□□ -0.16
SORT1-203ENST00000471996 RIMS4Q9H426 269 aaPredicted RBP14.05□□□□□ -0.16
SORT1-203ENST00000471996 SCTP09683 121 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 CTRB1P17538 263 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 UBE2KP61086 200 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 RPS27AP62979 156 aaKnown RBP14.04□□□□□ -0.16
SORT1-203ENST00000471996 CBX3Q13185 183 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 RBMS2Q15434 407 aaKnown RBP14.04□□□□□ -0.16
SORT1-203ENST00000471996 GLT8D1Q68CQ7 371 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 CTRB2Q6GPI1 263 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 OR4A47Q6IF82 309 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 OR10K2Q6IF99 312 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 RBPMS2Q6ZRY4 209 aaKnown RBP14.04□□□□□ -0.16
SORT1-203ENST00000471996 NKAIN3Q8N8D7 197 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 C2CD4CQ8TF44 421 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 PGLYRP3Q96LB9 341 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 SLC29A1Q99808 456 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 FBXL17Q9UF56 701 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 MGAT4AQ9UM21 535 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 MUC4Q99102 2169 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 PKD1P98161 4303 aa14.04□□□□□ -0.16
SORT1-203ENST00000471996 EI24O14681 340 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 UBBP0CG47 229 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 ARL3P36405 182 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 TAGLNQ01995 201 aaKnown RBP14.03□□□□□ -0.16
SORT1-203ENST00000471996 VMA21Q3ZAQ7 101 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 SLC38A6Q8IZM9 456 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 C11orf45Q8TAV5 145 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 ACOT12Q8WYK0 555 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 SPIN2AQ99865 258 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 SPIN2BQ9BPZ2 258 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 HDHD3Q9BSH5 251 aaPredicted RBP14.03□□□□□ -0.16
SORT1-203ENST00000471996 PLEKHJ1Q9NW61 149 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 RDH8Q9NYR8 311 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 UBQLN2Q9UHD9 624 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 FBXL7Q9UJT9 491 aa14.03□□□□□ -0.16
SORT1-203ENST00000471996 DCKP27707 260 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 RTL8BQ17RB0 113 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 IDO2Q6ZQW0 420 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 GVQW1Q8N7I0 195 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 DERL3Q96Q80 235 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 NICN1Q9BSH3 213 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 TM2D1Q9BX74 207 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 TMEM59Q9BXS4 323 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 SDHAF2Q9NX18 166 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 APLNQ9ULZ1 77 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 HSPG2P98160 4391 aa14.02□□□□□ -0.17
SORT1-203ENST00000471996 IGKV1-6A0A0C4DH72 117 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 XRCC3O43542 346 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 IGHV3-23P01764 117 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 C8orf88P0DMB2 117 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 RRASP10301 218 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 CLEC19AQ6UXS0 136 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 SLC25A42Q86VD7 318 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 ZFP41Q8N8Y5 198 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 PYDC1Q8WXC3 89 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 MARC2Q969Z3 335 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 CCDC140Q96MF4 163 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 Q9N2K0 584 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 AK3Q9UIJ7 227 aa14.01□□□□□ -0.17
SORT1-203ENST00000471996 EBAG9O00559 213 aa14□□□□□ -0.17
SORT1-203ENST00000471996 RPL35AP18077 110 aaKnown RBP14□□□□□ -0.17
SORT1-203ENST00000471996 FCGR2BP31994 310 aaPredicted RBP14□□□□□ -0.17
SORT1-203ENST00000471996 APH1BQ8WW43 257 aa14□□□□□ -0.17
SORT1-203ENST00000471996 SPAG8Q99932 426 aaPredicted RBP14□□□□□ -0.17
SORT1-203ENST00000471996 OR2D2Q9H210 308 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms