RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 A0A0G2JLM5 398 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 SRRM4A7MD48 611 aaKnown RBP17.31■□□□□ 0.36
C9orf3-213ENST00000471978 RRASP10301 218 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 GALP22466 123 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 SRSF7Q16629 238 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■■■■■ 30.9
C9orf3-213ENST00000471978 Q6ZS49 121 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 OVCH2Q7RTZ1 564 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 NR2C2APQ86WQ0 139 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 SBSPONQ8IVN8 264 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 TMEM68Q96MH6 324 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 RAB26Q9ULW5 256 aa17.31■□□□□ 0.36
C9orf3-213ENST00000471978 IGKV1D-8A0A087WSZ0 117 aa17.3■□□□□ 0.36
C9orf3-213ENST00000471978 SMIM30A4D0T7 59 aa17.3■□□□□ 0.36
C9orf3-213ENST00000471978 ANKRD34BA5PLL1 514 aa17.3■□□□□ 0.36
C9orf3-213ENST00000471978 ZP3P21754 424 aa17.3■□□□□ 0.36
C9orf3-213ENST00000471978 H1FOOQ8IZA3 346 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-213ENST00000471978 ADTRPQ96IZ2 230 aa17.3■□□□□ 0.36
C9orf3-213ENST00000471978 ELF5Q9UKW6 265 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-213ENST00000471978 TRIM64CA6NLI5 447 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 FRMD6-AS1P0C7T7 363 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 DUTP33316 252 aaKnown RBP17.29■□□□□ 0.36
C9orf3-213ENST00000471978 GABARAPL2P60520 117 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 ARL6IP1Q15041 203 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 HAPLN4Q86UW8 402 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 DDB2Q92466 427 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 RSRP1Q9BUV0 290 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 STUB1Q9UNE7 303 aa17.29■□□□□ 0.36
C9orf3-213ENST00000471978 MRPS14O60783 128 aaKnown RBP17.28■□□□□ 0.36
C9orf3-213ENST00000471978 VMA21Q3ZAQ7 101 aa17.28■□□□□ 0.36
C9orf3-213ENST00000471978 CDNFQ49AH0 187 aa17.28■□□□□ 0.36
C9orf3-213ENST00000471978 TEX45Q8NA69 505 aa17.28■□□□□ 0.36
C9orf3-213ENST00000471978 PHB2Q99623 299 aa17.28■□□□□ 0.36
C9orf3-213ENST00000471978 TINAGL1Q9GZM7 467 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-213ENST00000471978 COA4Q9NYJ1 87 aa17.28■□□□□ 0.36
C9orf3-213ENST00000471978 LINC00473A8K010 186 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 BRI3O95415 125 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 CRYZL1O95825 349 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 APELAP0DMC3 54 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 DTYMKP23919 212 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 UBE2KP61086 200 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 MRGPRG-AS1Q2M3A8 158 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 UBE2UQ5VVX9 321 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 ANKRD13BQ86YJ7 626 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 ST6GALNAC5Q9BVH7 336 aa17.27■□□□□ 0.36
C9orf3-213ENST00000471978 DNAH7Q8WXX0 4024 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 MSGN1A6NI15 193 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 NOTOA8MTQ0 251 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 J3QRK9 145 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 IGLV1-51P01701 117 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 AADACP22760 399 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 PSMB9P28065 219 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 DEFA5Q01523 94 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 KLF5Q13887 457 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-213ENST00000471978 PRSS8Q16651 343 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 IDO2Q6ZQW0 420 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 RCHY1Q96PM5 261 aa17.26■□□□□ 0.35
C9orf3-213ENST00000471978 TXNL4BQ9NX01 149 aaKnown RBP17.26■□□□□ 0.35
C9orf3-213ENST00000471978 C3orf84H3BNL1 204 aa17.25■□□□□ 0.35
C9orf3-213ENST00000471978 FGF9P31371 208 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-213ENST00000471978 TNXAQ16473 311 aa17.25■□□□□ 0.35
C9orf3-213ENST00000471978 HACD4Q5VWC8 232 aa17.25■□□□□ 0.35
C9orf3-213ENST00000471978 SPARTQ8N0X7 666 aa17.25■□□□□ 0.35
C9orf3-213ENST00000471978 OSR1Q8TAX0 266 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-213ENST00000471978 USMG5Q96IX5 58 aa17.25■□□□□ 0.35
C9orf3-213ENST00000471978 PEF1Q9UBV8 284 aaKnown RBP17.25■□□□□ 0.35
C9orf3-213ENST00000471978 CTXN2P0C2S0 81 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 DYRK1AQ13627 763 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 ZNF343Q6P1L6 599 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 ZNF645Q8N7E2 425 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 OR9G4Q8NGQ1 327 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 SRSF12Q8WXF0 261 aaKnown RBP17.24■□□□□ 0.35
C9orf3-213ENST00000471978 ACOT12Q8WYK0 555 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 DCSTAMPQ9H295 470 aa17.24■□□□□ 0.35
C9orf3-213ENST00000471978 MPPED1O15442 326 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 NFYAP23511 347 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-213ENST00000471978 SYNJ2BPP57105 145 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 TPRA1Q86W33 373 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 ADAD2Q8NCV1 583 aaKnown RBP17.23■□□□□ 0.35
C9orf3-213ENST00000471978 NUDCD2Q8WVJ2 157 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 DCUN1D5Q9BTE7 237 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 ZMAT4Q9H898 229 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 DAPK2Q9UIK4 370 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 OR2W1Q9Y3N9 320 aa17.23■□□□□ 0.35
C9orf3-213ENST00000471978 TMEM235A6NFC5 223 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 FCGR3BO75015 233 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 RBMXL2O75526 392 aaKnown RBP17.22■□□□□ 0.35
C9orf3-213ENST00000471978 TRBV12-3P01733 135 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 HLA-DQB1P01920 261 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 OR9G9P0C7N8 305 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 Q8N1Y9 231 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 FCGR1BQ92637 280 aa17.22■□□□□ 0.35
C9orf3-213ENST00000471978 ZNF430Q9H8G1 570 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-213ENST00000471978 CREBL2O60519 120 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-213ENST00000471978 TUSC2O75896 110 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 SCGNO76038 276 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 ACTL6BO94805 426 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 SAA1P0DJI8 122 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-213ENST00000471978 IGHV4-30-4P0DP06 118 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 GNG2P59768 71 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 CDK10Q15131 360 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms