RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RAB22AQ9UL26 194 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 TPRKBQ9Y3C4 175 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 SMAD5-AS1Q9Y6J3 95 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 IGKV1D-13A0A0B4J2D9 117 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 A0A1B0GW64 132 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 MSGN1A6NI15 193 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 MFNGO00587 321 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 SSX5O60225 188 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 IGLV2-14P01704 120 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 IGKV1-13P0DP09 117 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 SYNJ2BPP57105 145 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 ZNF45Q02386 682 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 KLF5Q13887 457 aaPredicted RBP6.16□□□□□ -1.42
USP48-207ENST00000471752 CDNFQ49AH0 187 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 C22orf42Q6IC83 251 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 MOB1BQ7L9L4 216 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 VKORC1L1Q8N0U8 176 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 POC5Q8NA72 575 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 OR56B1Q8NGI3 324 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 DDB2Q92466 427 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 FLYWCH2Q96CP2 140 aaKnown RBP6.16□□□□□ -1.42
USP48-207ENST00000471752 RAB3CQ96E17 227 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 RCHY1Q96PM5 261 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 CABLES2Q9BTV7 478 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 ACOT13Q9NPJ3 140 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 ZNF221Q9UK13 617 aa6.16□□□□□ -1.42
USP48-207ENST00000471752 TRAV1-2A0A0B4J238 106 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 IFITM5A6NNB3 132 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 RBBP9O75884 186 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 ARL6IP5O75915 188 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 CNIH1O95406 144 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 IGLV1-51P01701 117 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 HLA-AP01891 365 aaKnown RBP6.15□□□□□ -1.42
USP48-207ENST00000471752 FCER2P06734 321 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 CSN3P07498 182 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 NFYAP23511 347 aaPredicted RBP6.15□□□□□ -1.42
USP48-207ENST00000471752 DUTP33316 252 aaKnown RBP6.15□□□□□ -1.42
USP48-207ENST00000471752 TMEM267Q0VDI3 215 aaPredicted RBP6.15□□□□□ -1.42
USP48-207ENST00000471752 TMEM177Q53S58 311 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 OR2B11Q5JQS5 317 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 CASC10Q5T4H9 136 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 H1FOOQ8IZA3 346 aaPredicted RBP6.15□□□□□ -1.42
USP48-207ENST00000471752 OR4A4PQ8NGN8 299 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 OR5H6Q8NGV6 325 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 NUDCD2Q8WVJ2 157 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 THRSPQ92748 146 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 TSNAXQ99598 290 aaKnown RBP6.15□□□□□ -1.42
USP48-207ENST00000471752 RNF5Q99942 180 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 ST6GALNAC5Q9BVH7 336 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 DMRT1Q9Y5R6 373 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 S4R3C0 116 aa6.15□□□□□ -1.42
USP48-207ENST00000471752 VPS13DQ5THJ4 4388 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 TRDV1A0A1B0GX56 115 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 HMX3A6NHT5 357 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 CRYZL1O95825 349 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 IL6RP08887 468 aaPredicted RBP6.14□□□□□ -1.43
USP48-207ENST00000471752 IGHV4-30-4P0DP06 118 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 HIST1H1DP16402 221 aaKnown RBP6.14□□□□□ -1.43
USP48-207ENST00000471752 TGFBR1P36897 503 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 INSL3P51460 131 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 PRSS8Q16651 343 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 ZNF773Q6PK81 442 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 PDPNQ86YL7 162 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 SPARTQ8N0X7 666 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 ADAD2Q8NCV1 583 aaKnown RBP6.14□□□□□ -1.43
USP48-207ENST00000471752 OR10J5Q8NHC4 309 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 HARBI1Q96MB7 349 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 THAP7Q9BT49 309 aaPredicted RBP6.14□□□□□ -1.43
USP48-207ENST00000471752 RSRP1Q9BUV0 290 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 TINAGL1Q9GZM7 467 aaPredicted RBP6.14□□□□□ -1.43
USP48-207ENST00000471752 ATG5Q9H1Y0 275 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 OR51E2Q9H255 320 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 ZNF430Q9H8G1 570 aaPredicted RBP6.14□□□□□ -1.43
USP48-207ENST00000471752 RETNQ9HD89 108 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 AKIP1Q9NQ31 210 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 NDUFB11Q9NX14 153 aa6.14□□□□□ -1.43
USP48-207ENST00000471752 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 C13orf42A0A1B0GVH6 325 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 TMEM235A6NFC5 223 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 ERICH4A6NGS2 130 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 PPP5D1E7EU14 171 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 BMPR1BO00238 502 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 SHOXO15266 292 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 IGHV3-23P01764 117 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 APOA2P02652 100 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 RAB3BP20337 219 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 LGALS7P47929 136 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 MECP2P51608 486 aaKnown RBP6.13□□□□□ -1.43
USP48-207ENST00000471752 PITPNAQ00169 270 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 EIF4EBP1Q13541 118 aaPredicted RBP6.13□□□□□ -1.43
USP48-207ENST00000471752 TRAM1Q15629 374 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 TBCEQ15813 527 aaPredicted RBP6.13□□□□□ -1.43
USP48-207ENST00000471752 TNXAQ16473 311 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 ZNF343Q6P1L6 599 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 ZNF367Q7RTV3 350 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 GVQW1Q8N7I0 195 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 MUC7Q8TAX7 377 aa6.13□□□□□ -1.43
USP48-207ENST00000471752 OR4C12Q96R67 309 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms