RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 A0A087WUU8 490 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 TRAV38-1A0A0B4J264 116 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 TRAPPC2LH3BP13 241 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 TRGC1P0CF51 173 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 XIAPP98170 497 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 FLOT2Q14254 428 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 MIAQ16674 131 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 TEX36Q5VZQ5 186 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 DCXRQ7Z4W1 244 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 LRRC6Q86X45 466 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 NATD1Q8N6N6 113 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 OR13C8Q8NGS7 320 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 BCL7BQ9BQE9 202 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 SPRR2GQ9BYE4 73 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 COMMD9Q9P000 198 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 EXPH5Q8NEV8 1989 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 STRCQ7RTU9 1775 aa-0.14□□□□□ -2.43
PRPF40A-207ENST00000471701 GREB1Q4ZG55 1949 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 ABCC12Q96J65 1359 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 EML5Q05BV3 1969 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 MEIS3P1A6NDR6 274 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 OR51F1A6NGY5 319 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 M0R381 172 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 ARL6IP5O75915 188 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 PSMB8P28062 276 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 EMP1P54849 157 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 TMEM267Q0VDI3 215 aaPredicted RBP-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 SCGB1D4Q6XE38 83 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 TMEM86AQ8N2M4 240 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 SLC22A24Q8N4F4 322 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 MITD1Q8WV92 249 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 FAM210AQ96ND0 272 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 HBEGFQ99075 208 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 TMEM222Q9H0R3 208 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 NCOR1P1Q9H4R4 102 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 NPATQ14207 1427 aa-0.15□□□□□ -2.43
PRPF40A-207ENST00000471701 KIF24Q5T7B8 1368 aa-0.16□□□□□ -2.43
PRPF40A-207ENST00000471701 TONSLQ96HA7 1378 aa-0.16□□□□□ -2.43
PRPF40A-207ENST00000471701 TRBV6-7A0A0A0MS04 114 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 A0A0J9YW62 118 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 RAB19A4D1S5 217 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 TMEM212A6NML5 194 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 HBZP02008 142 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 LIMS3P0CW19 117 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 LIMS4P0CW20 117 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 CRATP43155 626 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 RAB14P61106 215 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 C18orf21Q32NC0 220 aaPredicted RBP-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 FAM27BQ5VT28 67 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 TMEM56Q96MV1 263 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 C10orf95Q9H7T3 257 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 UBQLN4Q9NRR5 601 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 ENPP5Q9UJA9 477 aa-0.16□□□□□ -2.44
PRPF40A-207ENST00000471701 C19orf84I3L1E1 186 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 SGCEO43556 437 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 OTCP00480 354 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 KRTAP2-3P0C7H8 128 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 AGTR1P30556 359 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 TBPL1P62380 186 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 BTN3A2P78410 334 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 EIF4G1Q04637 1599 aaKnown RBP-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 LCN8Q6JVE9 175 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 CPNE2Q96FN4 548 aaPredicted RBP-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 OR7D2Q96RA2 312 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 KRTAP2-4Q9BYR9 128 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 KRTAP2-1Q9BYU5 128 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 EIF5A2Q9GZV4 153 aaKnown RBP-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 LHFPL6Q9Y693 200 aa-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 DICER1Q9UPY3 1922 aaKnown RBP-0.17□□□□□ -2.44
PRPF40A-207ENST00000471701 KCPQ6ZWJ8 1503 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 KIAA0232Q92628 1395 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 LDOC1O95751 146 aaPredicted RBP-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 CSTAP01040 98 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 TFPTP0C1Z6 253 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 UBBP0CG47 229 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 SFTPCP11686 197 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 DAD1P61803 113 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 ACSM3Q53FZ2 586 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 TESCQ96BS2 214 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 UGT2B28Q9BY64 529 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 RAB1BQ9H0U4 201 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 TRABDQ9H4I3 376 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 EMC3Q9P0I2 261 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 NAT8Q9UHE5 227 aa-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 MRM2Q9UI43 246 aaKnown RBP-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 NUP153P49790 1475 aaKnown RBP-0.18□□□□□ -2.44
PRPF40A-207ENST00000471701 ZNF462Q96JM2 2506 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 NAV3Q8IVL0 2385 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 CREBL2O60519 120 aaPredicted RBP-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 UGT2B11O75310 529 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 TMEM33P57088 247 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 FXYD7P58549 80 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 HIST1H4AP62805 103 aaKnown RBP-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 Q8WTZ3 238 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 TMEM239Q8WW34 195 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 CIDECQ96AQ7 238 aaPredicted RBP-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 CHST6Q9GZX3 395 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 COL4A5P29400 1685 aa-0.19□□□□□ -2.44
PRPF40A-207ENST00000471701 OR6C6A6NF89 314 aa-0.2□□□□□ -2.44
PRPF40A-207ENST00000471701 COPEO14579 308 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms