RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SLC22A5O76082 557 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 S1PR2O95136 353 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 NDUFA3O95167 84 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 PGAM2P15259 253 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 AANATQ16613 207 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 IZUMO4Q1ZYL8 232 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 NMSQ5H8A3 153 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 LPCAT3Q6P1A2 487 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 Q6ZS46 218 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 LYG2Q86SG7 212 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 TGIF2LXQ8IUE1 241 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 PUSL1Q8N0Z8 303 aaKnown RBP7.88□□□□□ -1.15
SF3A1-207ENST00000471342 CADM3Q8N126 398 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 Q8N9W7 124 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 NPBQ8NG41 125 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 ZFAND1Q8TCF1 268 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 CHAC2Q8WUX2 184 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 EAF1Q96JC9 268 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-207ENST00000471342 HSD17B10Q99714 261 aaKnown RBP7.88□□□□□ -1.15
SF3A1-207ENST00000471342 TMEM222Q9H0R3 208 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 TPSG1Q9NRR2 321 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 COPZ2Q9P299 210 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 HIVEP2P31629 2446 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 CENPXA8MT69 81 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 G3V3Q6 166 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 FCN1O00602 326 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 PITX3O75364 302 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 CRLF1O75462 422 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 IGHV4-59P01825 116 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 SNRNP70P08621 437 aaKnown RBP7.87□□□□□ -1.15
SF3A1-207ENST00000471342 EGR2P11161 476 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-207ENST00000471342 HLA-GP17693 338 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 THBS3P49746 956 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 DEFA1P59665 94 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 DEFA3P59666 94 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 TATDN3Q17R31 274 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 OR2B11Q5JQS5 317 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 C11orf87Q6NUJ2 197 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 TMED4Q7Z7H5 227 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 FAM71E2Q8N5Q1 922 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 SIGLECL1Q8N7X8 197 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 OR51H1Q8NH63 302 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 ALG5Q9Y673 324 aa7.87□□□□□ -1.15
SF3A1-207ENST00000471342 A0A0B4J2A0 478 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 LINC01548A6NM66 108 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 FCGR3BO75015 233 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 ADAP1O75689 374 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 DUS4LO95620 317 aaKnown RBP7.86□□□□□ -1.15
SF3A1-207ENST00000471342 MYOD1P15172 320 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 AKR1C4P17516 323 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 LPAR6P43657 344 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 INPP1P49441 399 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 RIPPLY3P57055 190 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 PJVKQ0ZLH3 352 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 SLC9A3R2Q15599 337 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-207ENST00000471342 LIN54Q6MZP7 749 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 LYZL2Q7Z4W2 148 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 VKORC1L1Q8N0U8 176 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 SPAG16Q8N0X2 631 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 OR11H7Q8NGC8 314 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 ZNF431Q8TF32 576 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-207ENST00000471342 TAF15Q92804 592 aaKnown RBP eCLIP7.86□□□□□ -1.15
SF3A1-207ENST00000471342 RPEQ96AT9 228 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 GPR146Q96CH1 333 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 S1PR3Q99500 378 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 SSX3Q99909 188 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 C11orf1Q9H5F2 150 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 PLEKHA2Q9HB19 425 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 SHPKQ9UHJ6 478 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 TCF19Q9Y242 345 aa7.86□□□□□ -1.15
SF3A1-207ENST00000471342 AMMECR1Q9Y4X0 333 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-207ENST00000471342 SNRPGP15A8MWD9 76 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 IGKV1D-33P01593 117 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 IGKV1-33P01594 117 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 OR9G9P0C7N8 305 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 CXCL3P19876 107 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 H2BFSP57053 126 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 RELBQ01201 579 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 SRSF4Q08170 494 aaKnown RBP7.85□□□□□ -1.15
SF3A1-207ENST00000471342 PSG5Q15238 335 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 C19orf54Q5BKX5 351 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 PLET1Q6UQ28 207 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 MOB3BQ86TA1 216 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 PDPNQ86YL7 162 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 TCTEX1D1Q8N7M0 179 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 MINDY2Q8NBR6 621 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 ENKURQ8TC29 256 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 TCTEX1D2Q8WW35 142 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 ADTRPQ96IZ2 230 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 WASHC3Q9Y3C0 194 aa7.85□□□□□ -1.15
SF3A1-207ENST00000471342 H3BUX3 64 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 HOXA3O43365 443 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-207ENST00000471342 TXNL1O43396 289 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 CRYZL1O95825 349 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 SAA1P0DJI8 122 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-207ENST00000471342 SULT1A3P0DMM9 295 aa7.84□□□□□ -1.15
SF3A1-207ENST00000471342 SULT1A4P0DMN0 295 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms