RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PABPC1L2AQ5JQF8 200 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 FAM201AQ5SY85 155 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 ERICH5Q6P6B1 374 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 C5orf46Q6UWT4 87 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 LRRC18Q8N456 261 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 FAM71E2Q8N5Q1 922 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CLDN22Q8N7P3 220 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CT45A3Q8NHU0 189 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 ANGPTL6Q8NI99 470 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 SLC7A13Q8TCU3 470 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 KLF14Q8TD94 323 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-204ENST00000471245 C10orf82Q8WW14 230 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 SLC25A44Q96H78 314 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-204ENST00000471245 OR52B2Q96RD2 323 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 PRSS27Q9BQR3 290 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 C1orf198Q9H425 327 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 RETNQ9HD89 108 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CLN6Q9NWW5 311 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 VAPAQ9P0L0 249 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 RPS6KB2Q9UBS0 482 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 FLVCR2Q9UPI3 526 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 SIGLEC9Q9Y336 463 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 AGRNO00468 2067 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 IGHV1-69DA0A0B4J2H0 117 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 LCE6AA0A183 80 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 C5orf49A4QMS7 147 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 PEX7O00628 323 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 KPNA4O00629 521 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-204ENST00000471245 E2F6O75461 281 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 HSBP1O75506 76 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 CLIC3O95833 236 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 MOSP00540 346 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 PTHP01270 115 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 INSP01308 110 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 IGHV1-69P01742 117 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 IL6P05231 212 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 TSPAN19P0C672 248 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 TGFBR2P37173 567 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 PMELP40967 661 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 RORCP51449 518 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 POLR2JP52435 117 aaKnown RBP3.79□□□□□ -1.8
CKS1B-204ENST00000471245 FGF8P55075 233 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-204ENST00000471245 UBE2MP61081 183 aaKnown RBP3.79□□□□□ -1.8
CKS1B-204ENST00000471245 PPP1CBP62140 327 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 CDK6Q00534 326 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 STX3Q13277 289 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 AQP6Q13520 282 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 GPR176Q14439 515 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 COA6Q5JTJ3 125 aaKnown RBP3.79□□□□□ -1.8
CKS1B-204ENST00000471245 C10orf128Q5T292 105 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 NOXO1Q8NFA2 376 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 OR4S1Q8NGB4 309 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 OR10R2Q8NGX6 335 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 SUN5Q8TC36 379 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 ISOC2Q96AB3 205 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF426Q9BUY5 554 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 TMEM109Q9BVC6 243 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 CHID1Q9BWS9 393 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 SLC19A3Q9BZV2 496 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 CD300AQ9UGN4 299 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 NUFIP1Q9UHK0 495 aaKnown RBP3.79□□□□□ -1.8
CKS1B-204ENST00000471245 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 USH1CQ9Y6N9 552 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 U3KQK5 164 aa3.79□□□□□ -1.8
CKS1B-204ENST00000471245 IGHV3-64DA0A0J9YX35 117 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 CPSF4LA6NMK7 179 aaKnown RBP3.78□□□□□ -1.8
CKS1B-204ENST00000471245 LYRM9A8MSI8 78 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 RNASEK-C17orf49H0YIS7 233 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 CHP2O43745 196 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ENSAO43768 121 aaKnown RBP3.78□□□□□ -1.8
CKS1B-204ENST00000471245 CYB5R3P00387 301 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-204ENST00000471245 OXTP01178 125 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 HBE1P02100 147 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 OPN1SWP03999 348 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 IDO1P14902 403 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 APLNRP35414 380 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ACTA2P62736 377 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ACTG2P63267 376 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ACTC1P68032 377 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ACTA1P68133 377 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 RPL18Q07020 188 aaKnown RBP3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ECH1Q13011 328 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 FADDQ13158 208 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ENDOGQ14249 297 aaKnown RBP3.78□□□□□ -1.8
CKS1B-204ENST00000471245 RFX4Q33E94 735 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF404Q494X3 552 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 SLC36A2Q495M3 483 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 HHATQ5VTY9 493 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 LCN12Q6JVE5 192 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 LYPD2Q6UXB3 125 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 TMPRSS11AQ6ZMR5 421 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 NKAIN4Q8IVV8 208 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 HSD17B11Q8NBQ5 300 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 WFDC9Q8NEX5 89 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 OR2Z1Q8NG97 314 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 OR8B3Q8NGG8 313 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 PFN4Q8NHR9 129 aa3.78□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF420Q8TAQ5 688 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-204ENST00000471245 SLC7A6Q92536 515 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms