RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 LYRM2Q9NU23 88 aaPredicted RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 RPS10-NUDT3A0A1W2PQS6 291 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 A1L4Q6 167 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 SYNGR2O43760 224 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 RBMXL2O75526 392 aaKnown RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 LIPFP07098 398 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 IAPPP10997 89 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 REG1BP48304 166 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 ERVK-16P61578 105 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 EWSR1Q01844 656 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMC4-211ENST00000469858 RPL7L1Q6DKI1 246 aaKnown RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 LINC00311Q8N616 119 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 ZNF596Q8TC21 504 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 MRPL20Q9BYC9 149 aaKnown RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 GSX2Q9BZM3 304 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 IGSF23A1L1A6 192 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 H3BP45 60 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 IGHV4-39P01824 125 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 NQO2P16083 231 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 PAX9P55771 341 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 LY6G5BQ8NDX9 201 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 IGFBPL1Q8WX77 278 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 RAB40CQ96S21 281 aa14.79□□□□□ -0.04
SMC4-211ENST00000469858 IGHV2-26A0A0B4J1V2 119 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 FAM90A26D6RGX4 464 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 OR9G9P0C7N8 305 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 TNFRSF9Q07011 255 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 CLLU1Q5K131 121 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 FAM74A1Q5RGS3 127 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 BAP18Q8IXM2 172 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 ZNF295-AS1Q8N0V1 137 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 TMEM252Q8N6L7 170 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 SLC25A31Q9H0C2 315 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 SLC35D1Q9NTN3 355 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 UBR5O95071 2799 aaPredicted RBP14.78□□□□□ -0.04
SMC4-211ENST00000469858 LOC105371242A0A075B767 164 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 RBP4P02753 201 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 RPL23AP62750 156 aaKnown RBP14.78□□□□□ -0.04
SMC4-211ENST00000469858 DIAPH2-AS1Q14236 149 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 RTL8BQ17RB0 113 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 TMEM186Q96B77 213 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 PHYHIPLQ96FC7 376 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 BPESC1Q9GZL8 116 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 HSPB7Q9UBY9 170 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 ITGB1BP2Q9UKP3 347 aa14.78□□□□□ -0.04
SMC4-211ENST00000469858 hCG_1809904A0A1W2PP81 198 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 A0A1W2PPE2 198 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 A0A1W2PR64 198 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 A0A1W2PRV1 198 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 OR2B8PP59922 312 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 UBE2KP61086 200 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 RBKSQ9H477 322 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 WSB1Q9Y6I7 421 aa14.77□□□□□ -0.04
SMC4-211ENST00000469858 COX6B1P14854 86 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 COX7A1P24310 79 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 RHOVQ96L33 236 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 CLEC7AQ9BXN2 247 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 TMEM140Q9NV12 185 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 CST7O76096 145 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 IGHV2-5P01817 119 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 APOA2P02652 100 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 IGKV1-16P04430 117 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 ARF6P62330 175 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 FAM71F2Q6NXP2 309 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 ST6GALNAC6Q969X2 333 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 QTRT1Q9BXR0 403 aaKnown RBP14.76□□□□□ -0.05
SMC4-211ENST00000469858 WFDC1Q9HC57 220 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 PSENENQ9NZ42 101 aa14.76□□□□□ -0.05
SMC4-211ENST00000469858 H7C2Y5 167 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 MED6O75586 246 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 JTBO76095 146 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 GAPDHP04406 335 aaKnown RBP14.75□□□□□ -0.05
SMC4-211ENST00000469858 IL3RAP26951 378 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 ZNF137PP52743 207 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 EIF5AP63241 154 aaKnown RBP14.75□□□□□ -0.05
SMC4-211ENST00000469858 TMEM267Q0VDI3 215 aaPredicted RBP14.75□□□□□ -0.05
SMC4-211ENST00000469858 TMEM217Q8N7C4 229 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 Q8N7P7 452 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 OR13D1Q8NGV5 346 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 OR4A16Q8NH70 328 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 TNFRSF14Q92956 283 aa14.75□□□□□ -0.05
SMC4-211ENST00000469858 TET2Q6N021 2002 aaPredicted RBP14.75□□□□□ -0.05
SMC4-211ENST00000469858 FAM90A9PA6NNJ1 464 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 H0YJW9 148 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 TXNL1O43396 289 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 NMBP08949 121 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 PDLIM4P50479 330 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 PRRX1P54821 245 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 CLINT1Q14677 625 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 HLA-DRB5Q30154 266 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 SPINK9Q5DT21 86 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 SP5Q6BEB4 398 aaPredicted RBP14.74□□□□□ -0.05
SMC4-211ENST00000469858 DHRS7BQ6IAN0 325 aaPredicted RBP14.74□□□□□ -0.05
SMC4-211ENST00000469858 TGIF2LXQ8IUE1 241 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 TMED6Q8WW62 240 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 NABP2Q9BQ15 211 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 SIRT7Q9NRC8 400 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 TRAV3A0A0B4J244 114 aa14.74□□□□□ -0.05
SMC4-211ENST00000469858 HRASP01112 189 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms