RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 VPREB3Q9UKI3 123 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 HILPDAQ9Y5L2 63 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 A0A0A6YYH2 397 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 A0A1W2PPI3 338 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 MEX3AA1L020 520 aaKnown RBP4.99□□□□□ -1.61
PTCD3-208ENST00000469585 A6NJ64 397 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 H3BUX3 64 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 XRCC3O43542 346 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 VENTXO95231 258 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 GAPDHP04406 335 aaKnown RBP4.99□□□□□ -1.61
PTCD3-208ENST00000469585 MELTFP08582 738 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 OMGP23515 440 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 ZBTB25P24278 435 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 S100GP29377 79 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 SDC2P34741 201 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 IER3P46695 156 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 RORCP51449 518 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 RAG2P55895 527 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 ARPC4P59998 168 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 PLA2G7Q13093 441 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 SLC9A3R2Q15599 337 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 SSX1Q16384 188 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 HLA-DRB5Q30154 266 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 SFXN4Q6P4A7 337 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 TMEM91Q6ZNR0 172 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 C6orf201Q7Z4U5 140 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 OR8H3Q8N146 312 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 Q8N7P7 452 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 SLC24A4Q8NFF2 622 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 OR10R2Q8NGX6 335 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 OR10J5Q8NHC4 309 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 RFESDQ8TAC1 157 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 C15orf40Q8WUR7 153 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 ACOT12Q8WYK0 555 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 MS4A10Q96PG2 267 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 TM2D1Q9BX74 207 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 OR51E2Q9H255 320 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 TAF9BQ9HBM6 251 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF286AQ9HBT8 521 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 IFT46Q9NQC8 304 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 ZFP57Q9NU63 452 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF221Q9UK13 617 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 JPT1Q9UK76 154 aa4.99□□□□□ -1.61
PTCD3-208ENST00000469585 NSD1Q96L73 2696 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-208ENST00000469585 FAM172BPA6NC97 362 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 TMEM14DPA8MWL7 114 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 FAM25AB3EWG3 89 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 FAM25CB3EWG5 89 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 FAM25GB3EWG6 89 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 BUB1B-PAK6H3BSN5 160 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 BMPR1BO00238 502 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 HBZP02008 142 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 MT-ND4P03905 459 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 CTXN2P0C2S0 81 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 CD34P28906 385 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 SSTR5P35346 364 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 CBX5P45973 191 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 CLDN12P56749 244 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 LSM3P62310 102 aaKnown RBP4.98□□□□□ -1.61
PTCD3-208ENST00000469585 HTD2P86397 168 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 PLGLAQ15195 96 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 UBE2NLQ5JXB2 153 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 MOB3BQ86TA1 216 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 TGIF2LXQ8IUE1 241 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 TMEM104Q8NE00 496 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 DMBX1Q8NFW5 382 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 PLPPR1Q8TBJ4 325 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 BORCS5Q969J3 196 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 COQ2Q96H96 371 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 FAAP24Q9BTP7 215 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 GON7Q9BXV9 100 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 CHIAQ9BZP6 476 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 RANBP3Q9H6Z4 567 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-208ENST00000469585 PIPOXQ9P0Z9 390 aa4.98□□□□□ -1.61
PTCD3-208ENST00000469585 ABCA2Q9BZC7 2435 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 FN1P02751 2386 aaKnown RBP4.97□□□□□ -1.61
PTCD3-208ENST00000469585 MDFIC2A0A1B0GVS7 189 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 SMIM30A4D0T7 59 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 NCBP2LA6PVI3 153 aaKnown RBP4.97□□□□□ -1.61
PTCD3-208ENST00000469585 VGLL3A8MV65 326 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 ODF3BA8MYP8 253 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 TRDCB7Z8K6 153 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 HSD17B6O14756 317 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 RAB29O14966 203 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 RGS5O15539 181 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 SLC22A5O76082 557 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 DIRAS3O95661 229 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 IGHV4-59P01825 116 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 APOA2P02652 100 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 HIST1H1DP16402 221 aaKnown RBP4.97□□□□□ -1.61
PTCD3-208ENST00000469585 RAB13P51153 203 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 DYNLT3P51808 116 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 OR10A3P58181 314 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 HLA-DRB3P79483 266 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 PRB3Q04118 309 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-208ENST00000469585 LY6EQ16553 131 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 TMEM69Q5SWH9 247 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 TPTE2P1Q5T6R2 138 aa4.97□□□□□ -1.61
PTCD3-208ENST00000469585 OR10K2Q6IF99 312 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms