RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TXNL1O43396 289 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 PPIHO43447 177 aaKnown RBP7.67□□□□□ -1.18
SMC1A-205ENST00000469129 NXPH3O95157 252 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 HRASP01112 189 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 SOD3P08294 240 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 SEC11BP0C7V7 166 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 CCL3L1P16619 93 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 COL8A2P25067 703 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF134P52741 427 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 DLX6P56179 175 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 UBE2KP61086 200 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 BLOC1S1P78537 153 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 FAM74A1Q5RGS3 127 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF833PQ6ZTB9 187 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ODF3L1Q8IXM7 274 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 STPG2Q8N412 459 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 OR10X1Q8NGY0 326 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 OR4A16Q8NH70 328 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 TMED6Q8WW62 240 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 LEAP2Q969E1 77 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 TMEM186Q96B77 213 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 SAT2Q96F10 170 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-205ENST00000469129 CITED4Q96RK1 184 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ATP5SQ99766 215 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 GINS3Q9BRX5 216 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ARV1Q9H2C2 271 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 PSENENQ9NZ42 101 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ARID1AO14497 2285 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 ROS1P08922 2347 aa7.67□□□□□ -1.18
SMC1A-205ENST00000469129 TET2Q6N021 2002 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 A0A1W2PPE3 182 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 LYNX1G3V0Z9 82 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 IFNA5P01569 189 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 IGHV3-7P01780 117 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 IGHV1-8P0DP01 117 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 LYNX1P0DP58 116 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 IAPPP10997 89 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 GPR6P46095 362 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 SULT1A2P50226 295 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 RAB5CP51148 216 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF137PP52743 207 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 BRWD1-AS2P59051 145 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 NHLH2Q02577 135 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 SRSF1Q07955 248 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 POU2AF1Q16633 256 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 AARDQ4LEZ3 155 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 AVPI1Q5T686 147 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 Q6ZRM9 215 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 HSD17B13Q7Z5P4 300 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 OR5C1Q8NGR4 320 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 OR52E5Q8NH55 327 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 DTD1Q8TEA8 209 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 PCNPQ8WW12 178 aaKnown RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 MARVELD3Q96A59 401 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 GNPNAT1Q96EK6 184 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 CXorf58Q96LI9 332 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 TSNAXQ99598 290 aaKnown RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF251Q9BRH9 671 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 TMEM133Q9H2Q1 129 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 RBKSQ9H477 322 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 SLC35D1Q9NTN3 355 aa7.66□□□□□ -1.18
SMC1A-205ENST00000469129 STRAPQ9Y3F4 350 aaKnown RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 AMMECR1Q9Y4X0 333 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 KLF2Q9Y5W3 355 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-205ENST00000469129 PPIAL4CA0A0B4J2A2 164 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 CEBPZOSA8MTT3 80 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 C19orf84I3L1E1 186 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 J3QR06 171 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PROP1O75360 226 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 FCN3O75636 299 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 MMP23AO75900 390 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 CRYZL1O95825 349 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 LIPFP07098 398 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PPIAL4GP0DN37 164 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 RAB13P51153 203 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 DYNLT3P51808 116 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 EFNA4P52798 201 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PRRX1P54821 245 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PAX9P55771 341 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 ERVFRD-1P60508 538 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 SPCS3P61009 180 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 GNB2P62879 340 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 TLE4Q04727 773 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 CLINT1Q14677 625 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 AANATQ16613 207 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 IZUMO4Q1ZYL8 232 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 WDR25Q64LD2 544 aaPredicted RBP7.65□□□□□ -1.18
SMC1A-205ENST00000469129 SLC25A24Q6NUK1 477 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF841Q6ZN19 808 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF429Q86V71 674 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PDPNQ86YL7 162 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 LILRB2Q8N423 598 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 EIF4E3Q8N5X7 224 aaKnown RBP7.65□□□□□ -1.18
SMC1A-205ENST00000469129 OSR1Q8TAX0 266 aaPredicted RBP7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PCGF1Q9BSM1 259 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 PATZ1Q9HBE1 687 aaKnown RBP7.65□□□□□ -1.18
SMC1A-205ENST00000469129 TMEM140Q9NV12 185 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 NUP50Q9UKX7 468 aa7.65□□□□□ -1.18
SMC1A-205ENST00000469129 FLNCQ14315 2725 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms