RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 NINJ1Q92982 152 aa13.22□□□□□ -0.29
TSPAN4-211ENST00000468468 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
TSPAN4-211ENST00000468468 SNX22Q96L94 193 aa13.22□□□□□ -0.29
TSPAN4-211ENST00000468468 OPN3Q9H1Y3 402 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-211ENST00000468468 HES4Q9HCC6 221 aa13.22□□□□□ -0.29
TSPAN4-211ENST00000468468 PMS2P5A8MQ11 134 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 WISP2O76076 250 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 TFF1P04155 84 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 NPSP0C0P6 89 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 TNFSF10P50591 281 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 BRWD1-AS2P59051 145 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 TGFBR3Q03167 851 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 BSXQ3C1V8 233 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 FFAR4Q5NUL3 377 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 SLC35E4Q6ICL7 350 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 CD82P27701 267 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 RPL23P62829 140 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 TFF3Q07654 80 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 KLF14Q8TD94 323 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 MRGPRDQ8TDS7 321 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 SNHG12Q9BXW3 62 aa13.21□□□□□ -0.29
TSPAN4-211ENST00000468468 RBMXL2O75526 392 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 GABRA2P47869 451 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 GCNT2Q8N0V5 402 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 OR4F5Q8NH21 305 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 OR4F4Q96R69 305 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 PARLQ9H300 379 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 TMEM250H0YL14 139 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 MLNRO43193 412 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 GNG10P50151 68 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 H2BFWTQ7Z2G1 175 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 COQ2Q96H96 371 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 HIST1H2BLQ99880 126 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 SRD5A3Q9H8P0 318 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 GAB2Q9UQC2 676 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 A6NNC1 897 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 RAB29O14966 203 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 CLDN14O95500 239 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 COX5AP20674 150 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 TUBG1P23258 451 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 SOX8P57073 446 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 C11orf53Q8IXP5 236 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 ZDHHC11Q9H8X9 412 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 PITPNC1Q9UKF7 332 aa13.2□□□□□ -0.3
TSPAN4-211ENST00000468468 LINC00205P59089 165 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 Q6ZR03 302 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 ZNF709Q8N972 641 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 RAB24Q969Q5 203 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 NPCDR1Q9BY65 106 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 IGHV3-43A0A0B4J1X8 118 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 H7BYZ3 331 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 IGHV3-43DP0DP04 118 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 GALR1P47211 349 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 ACP7Q6ZNF0 438 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 CIB3Q96Q77 187 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 MANBALQ9NQG1 85 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 LAMP3Q9UQV4 416 aa13.19□□□□□ -0.3
TSPAN4-211ENST00000468468 SMCO3A2RU48 225 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 TCF15Q12870 199 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 PRAMEF6Q5VXH4 476 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 OR5B12Q96R08 314 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 PYGO2Q9BRQ0 406 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 PAGE4O60829 102 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 AGFG2O95081 481 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 GZMBP10144 247 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 GZMHP20718 246 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 SSTR5P35346 364 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 GTF3C1Q12789 2109 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 RTP5Q14D33 572 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 CLEC12BQ2HXU8 276 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 INO80CQ6PI98 192 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 OR51G1Q8NGK1 321 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 RFESDQ8TAC1 157 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 TAAR6Q96RI8 345 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
TSPAN4-211ENST00000468468 LAMA5O15230 3695 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 LINC00473A8K010 186 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 DEFB108AA8MXU0 73 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 DEFA4P12838 97 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 CXXC4Q9H2H0 198 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 COL10A1Q03692 680 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 OR5R1Q8NH85 324 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 TMEM208Q9BTX3 173 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 ELOVL1Q9BW60 279 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 CBLN4Q9NTU7 201 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 PSG11Q9UQ72 335 aa13.17□□□□□ -0.3
TSPAN4-211ENST00000468468 GOLT1BQ9Y3E0 138 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms