RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 ZNF645Q8N7E2 425 aa14.1□□□□□ -0.15
CGREF1-208ENST00000467539 OR1N2Q8NGR9 330 aa14.1□□□□□ -0.15
CGREF1-208ENST00000467539 ABHD5Q8WTS1 349 aa14.1□□□□□ -0.15
CGREF1-208ENST00000467539 A3GALT2U3KPV4 340 aa14.1□□□□□ -0.15
CGREF1-208ENST00000467539 LINC00473A8K010 186 aa14.09□□□□□ -0.15
CGREF1-208ENST00000467539 K7EIL1 84 aa14.09□□□□□ -0.15
CGREF1-208ENST00000467539 ARPC1BO15143 372 aaKnown RBP14.09□□□□□ -0.15
CGREF1-208ENST00000467539 SHOXO15266 292 aa14.09□□□□□ -0.15
CGREF1-208ENST00000467539 FAM103A1Q9BTL3 118 aaKnown RBP14.09□□□□□ -0.15
CGREF1-208ENST00000467539 AUNIPQ9H7T9 357 aa14.09□□□□□ -0.15
CGREF1-208ENST00000467539 TPSG1Q9NRR2 321 aa14.09□□□□□ -0.15
CGREF1-208ENST00000467539 J3QRK9 145 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 TUSC2O75896 110 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 CNIH1O95406 144 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 CD40LGP29965 261 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 TGFBR1P36897 503 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 ZNF616Q08AN1 781 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 PJVKQ0ZLH3 352 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 HOGA1Q86XE5 327 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 TEX45Q8NA69 505 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 BEST4Q8NFU0 473 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 ARPC1AQ92747 370 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 S100A16Q96FQ6 103 aaKnown RBP14.08□□□□□ -0.16
CGREF1-208ENST00000467539 HARBI1Q96MB7 349 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 TMEM68Q96MH6 324 aa14.08□□□□□ -0.16
CGREF1-208ENST00000467539 WI2-2373I1.2A0A1W2PRP0 233 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 XRCC3O43542 346 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 IGLV2-14P01704 120 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 OR8U8P0C7N1 319 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 GNB1P62873 340 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 SSBP2P81877 361 aaPredicted RBP14.07□□□□□ -0.16
CGREF1-208ENST00000467539 C9orf66Q5T8R8 295 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 OSR1Q8TAX0 266 aaPredicted RBP14.07□□□□□ -0.16
CGREF1-208ENST00000467539 RHOVQ96L33 236 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 OR5B12Q96R08 314 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 SLA2Q9H6Q3 261 aa14.07□□□□□ -0.16
CGREF1-208ENST00000467539 RBMX2Q9Y388 322 aaKnown RBP14.07□□□□□ -0.16
CGREF1-208ENST00000467539 IGKV1D-13A0A0B4J2D9 117 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 RAMP3O60896 148 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 IGKV1-13P0DP09 117 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 CBX5P45973 191 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 UBE2KP61086 200 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 LSM3P62310 102 aaKnown RBP14.06□□□□□ -0.16
CGREF1-208ENST00000467539 MRGPRG-AS1Q2M3A8 158 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 DEFB121Q5J5C9 76 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 ASPHD1Q5U4P2 390 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 CASTOR1Q8WTX7 329 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 MS4A10Q96PG2 267 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 SCOCQ9UIL1 159 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 PRELID3BQ9Y3B1 194 aa14.06□□□□□ -0.16
CGREF1-208ENST00000467539 CRYZL1O95825 349 aa14.05□□□□□ -0.16
CGREF1-208ENST00000467539 RPL30P62888 115 aaKnown RBP14.05□□□□□ -0.16
CGREF1-208ENST00000467539 DGCR2P98153 550 aa14.05□□□□□ -0.16
CGREF1-208ENST00000467539 VMA21Q3ZAQ7 101 aa14.05□□□□□ -0.16
CGREF1-208ENST00000467539 GRPEL2Q8TAA5 225 aa14.05□□□□□ -0.16
CGREF1-208ENST00000467539 SEC14L6B5MCN3 397 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 H3BUA1 57 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 BRI3O95415 125 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 LGALS1P09382 135 aaKnown RBP14.04□□□□□ -0.16
CGREF1-208ENST00000467539 ARPC4P59998 168 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 EIF4EBP1Q13541 118 aaPredicted RBP14.04□□□□□ -0.16
CGREF1-208ENST00000467539 PRSS8Q16651 343 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 UBE2NLQ5JXB2 153 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 OVCH2Q7RTZ1 564 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 MFSD4AQ8N468 514 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 OR5T1Q8NG75 326 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 SLC25A46Q96AG3 418 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 HSD17B10Q99714 261 aaKnown RBP14.04□□□□□ -0.16
CGREF1-208ENST00000467539 FUNDC2Q9BWH2 189 aa14.04□□□□□ -0.16
CGREF1-208ENST00000467539 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 LINC01619G3V211 115 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 FCGR3BO75015 233 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 HSPB1P04792 205 aaKnown RBP14.03□□□□□ -0.16
CGREF1-208ENST00000467539 PTHLHP12272 177 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 FCGR2CP31995 323 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 INSL3P51460 131 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 TPPP2P59282 170 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 MSMO1Q15800 293 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 ZNF66Q6ZN08 573 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 POC5Q8NA72 575 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 OR5AP2Q8NGF4 316 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 GIMAP1Q8WWP7 306 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 DCUN1D4Q92564 292 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 KCTD12Q96CX2 325 aaKnown RBP14.03□□□□□ -0.16
CGREF1-208ENST00000467539 DCUN1D5Q9BTE7 237 aa14.03□□□□□ -0.16
CGREF1-208ENST00000467539 ALX4Q9H161 411 aaPredicted RBP14.03□□□□□ -0.16
CGREF1-208ENST00000467539 TRGV3P03979 118 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 AADACP22760 399 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 BRWD1-AS2P59051 145 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 KCTD9Q7L273 389 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 SAMD12Q8N8I0 201 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 OR13F1Q8NGS4 319 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 ZNF355PQ9NSJ1 428 aa14.02□□□□□ -0.17
CGREF1-208ENST00000467539 MRPS7Q9Y2R9 242 aaKnown RBP14.02□□□□□ -0.17
CGREF1-208ENST00000467539 A0A0G2JLM5 398 aa14.01□□□□□ -0.17
CGREF1-208ENST00000467539 OVOL1O14753 267 aa14.01□□□□□ -0.17
CGREF1-208ENST00000467539 IGHV3-11P01762 117 aa14.01□□□□□ -0.17
CGREF1-208ENST00000467539 CDK10Q15131 360 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms