RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 OR4D1Q15615 310 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 USF2Q15853 346 aaPredicted RBP0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 MOGQ16653 247 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 CLEC12BQ2HXU8 276 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 MESTQ5EB52 335 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 LRRC34Q8IZ02 419 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 TMEM86AQ8N2M4 240 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 OR1L8Q8NGR8 309 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 OR5AK3PQ8NH89 298 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 TLCD1Q96CP7 247 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 FAM210AQ96ND0 272 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 OR7D2Q96RA2 312 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 MED10Q9BTT4 135 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 TMEM222Q9H0R3 208 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 OR51B6Q9H340 312 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 CD300AQ9UGN4 299 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 KIAA0232Q92628 1395 aa0.42□□□□□ -2.34
CHMP2B-202ENST00000466696 CPAMD8Q8IZJ3 1885 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 NAV1Q8NEY1 1877 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 CHD5Q8TDI0 1954 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 CACNA1BQ00975 2339 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 LOC100506127A0A0U1RQW1 187 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 ERICH2A1L162 156 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 F5H5K5 113 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 FADS2O95864 444 aaKnown RBP0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 LINC00614P0C842 121 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 PET100P0DJ07 73 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 CCL2P13500 99 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 AQP4P55087 323 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 DLX6P56179 175 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 HIST1H4AP62805 103 aaKnown RBP0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 AKR1C1Q04828 323 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 ELOBQ15370 118 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 NDUFA5Q16718 116 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 Q3ZCU0 254 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 SLC51BQ86UW2 128 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 CRLF3Q8IUI8 442 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 LINC00471Q8N535 108 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 C15orf53Q8NAA6 179 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 LFNGQ8NES3 379 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 Q8WTZ3 238 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 RORBQ92753 470 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 MS4A6EQ96DS6 147 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 SERPINB11Q96P15 392 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 NMNAT3Q96T66 252 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 HBEGFQ99075 208 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 GNB1LQ9BYB4 327 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 NDEL1Q9GZM8 345 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 NSRP1Q9H0G5 558 aaKnown RBP0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 FAM96AQ9H5X1 160 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 ZNHIT6Q9NWK9 470 aaKnown RBP0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 FKBP14Q9NWM8 211 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 EMC3Q9P0I2 261 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 POLR3HQ9Y535 204 aaPredicted RBP0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 SNURFQ9Y675 71 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 KMT2DO14686 5537 aa0.41□□□□□ -2.34
CHMP2B-202ENST00000466696 NPATQ14207 1427 aa0.4□□□□□ -2.34
CHMP2B-202ENST00000466696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TRAV38-1A0A0B4J264 116 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 IGHV1-18A0A0C4DH31 117 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 GOLGA8QA0A0J9YX86 632 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 C21orf140B9A014 251 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 ATP8B1O43520 1251 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 HLA-DQB2P05538 268 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SYT1P21579 422 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 MSNP26038 577 aaKnown RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 CASQ1P31415 396 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 CA5AP35218 305 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SLCO1A2P46721 670 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TMEM33P57088 247 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 FXYD7P58549 80 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TPI1P60174 286 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TBPL1P62380 186 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SMAGPQ0VAQ4 97 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TMEM267Q0VDI3 215 aaPredicted RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 GNA13Q14344 377 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 Q1T7F1 81 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 ARHGAP11BQ3KRB8 267 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 RBM48Q5RL73 367 aaKnown RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SPATA31B1PQ5VZV4 182 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TBC1D19Q8N5T2 526 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 PACRGLQ8N7B6 248 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 DYNC2LI1Q8TCX1 351 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 ZNF675Q8TD23 568 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 CPNE2Q96FN4 548 aaPredicted RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SFRP2Q96HF1 295 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 RBP7Q96R05 134 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SERPINI1Q99574 410 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 MRPL57Q9BQC6 102 aaKnown RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 DCUN1D5Q9BTE7 237 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TIPINQ9BVW5 301 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 TTTY13Q9BZ97 58 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 CHMP4BQ9H444 224 aaKnown RBP0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 SPACA1Q9HBV2 294 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 ASCL3Q9NQ33 180 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 AGPAT3Q9NRZ7 376 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 PARVAQ9NVD7 372 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 HDGFL3Q9Y3E1 203 aa0.4□□□□□ -2.35
CHMP2B-202ENST00000466696 NUP160Q12769 1436 aa0.39□□□□□ -2.35
CHMP2B-202ENST00000466696 TMEM269A0A1B0GVZ9 245 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms