RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 HAGHQ16775 308 aa15.66■□□□□ 0.1
COL6A1-203ENST00000466285 ELOVL1Q9BW60 279 aa15.66■□□□□ 0.1
COL6A1-203ENST00000466285 ELF5Q9UKW6 265 aaPredicted RBP15.66■□□□□ 0.1
COL6A1-203ENST00000466285 H3BUA1 57 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 GNB3P16520 340 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 ZNF45Q02386 682 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 C10orf55Q5SWW7 151 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 C19orf35Q6ZS72 473 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.65■□□□□ 0.1
COL6A1-203ENST00000466285 OR4A4PQ8NGN8 299 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 DDB2Q92466 427 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 COA4Q9NYJ1 87 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 MGAT4AQ9UM21 535 aa15.65■□□□□ 0.1
COL6A1-203ENST00000466285 A0A075B6Q4 140 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 TRBV6-7A0A0A0MS04 114 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 LINC00473A8K010 186 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 MFNGO00587 321 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 DENRO43583 198 aaKnown RBP15.64■□□□□ 0.09
COL6A1-203ENST00000466285 ZP3P21754 424 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 TAGLNQ01995 201 aaKnown RBP15.64■□□□□ 0.09
COL6A1-203ENST00000466285 TMEM177Q53S58 311 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 ZNF343Q6P1L6 599 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 SGPP2Q8IWX5 399 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 ADAD2Q8NCV1 583 aaKnown RBP15.64■□□□□ 0.09
COL6A1-203ENST00000466285 FAM110AQ9BQ89 295 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 WFDC10AQ9H1F0 79 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 DUSP21Q9H596 190 aa15.64■□□□□ 0.09
COL6A1-203ENST00000466285 CD40LGP29965 261 aa15.63■□□□□ 0.09
COL6A1-203ENST00000466285 SSX1Q16384 188 aa15.63■□□□□ 0.09
COL6A1-203ENST00000466285 IZUMO2Q6UXV1 221 aa15.63■□□□□ 0.09
COL6A1-203ENST00000466285 OR56B1Q8NGI3 324 aa15.63■□□□□ 0.09
COL6A1-203ENST00000466285 ISOC1Q96CN7 298 aa15.63■□□□□ 0.09
COL6A1-203ENST00000466285 PEF1Q9UBV8 284 aaKnown RBP15.63■□□□□ 0.09
COL6A1-203ENST00000466285 SELENOKQ9Y6D0 94 aa15.63■□□□□ 0.09
COL6A1-203ENST00000466285 BMPR1BO00238 502 aa15.62■□□□□ 0.09
COL6A1-203ENST00000466285 SHOXO15266 292 aa15.62■□□□□ 0.09
COL6A1-203ENST00000466285 MLLT11Q13015 90 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-203ENST00000466285 NR2C2APQ86WQ0 139 aa15.62■□□□□ 0.09
COL6A1-203ENST00000466285 V9GY05 133 aa15.62■□□□□ 0.09
COL6A1-203ENST00000466285 SMIM30A4D0T7 59 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 MSGN1A6NI15 193 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 RAB27BO00194 218 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 RGS10O43665 173 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 ARL6IP5O75915 188 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 CRYZL1O95825 349 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 HSPA13P48723 471 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 TNXAQ16473 311 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 PRSS8Q16651 343 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 SRSF12Q8WXF0 261 aaKnown RBP15.61■□□□□ 0.09
COL6A1-203ENST00000466285 RAB3CQ96E17 227 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 PLEKHA3Q9HB20 300 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 AKIP1Q9NQ31 210 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 SCN3BQ9NY72 215 aa15.61■□□□□ 0.09
COL6A1-203ENST00000466285 A0A0G2JLM5 398 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 J3QRK9 145 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 DUTP33316 252 aaKnown RBP15.6■□□□□ 0.09
COL6A1-203ENST00000466285 SERPINB10P48595 397 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 MECP2P51608 486 aaKnown RBP15.6■□□□□ 0.09
COL6A1-203ENST00000466285 H1FOOQ8IZA3 346 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-203ENST00000466285 OR10J5Q8NHC4 309 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 PHB2Q99623 299 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 SPATA25Q9BR10 227 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 CCDC90BQ9GZT6 254 aa15.6■□□□□ 0.09
COL6A1-203ENST00000466285 BRI3O95415 125 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 SAA1P0DJI8 122 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-203ENST00000466285 HIST1H1DP16402 221 aaKnown RBP15.59■□□□□ 0.09
COL6A1-203ENST00000466285 CRHBPP24387 322 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 LGALS7P47929 136 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 RHOGP84095 191 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 EXOSC2Q13868 293 aaKnown RBP15.59■□□□□ 0.09
COL6A1-203ENST00000466285 OR2B11Q5JQS5 317 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 OR10R2Q8NGX6 335 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 MGLLQ99685 303 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 ZNF430Q9H8G1 570 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-203ENST00000466285 RAB26Q9ULW5 256 aa15.59■□□□□ 0.09
COL6A1-203ENST00000466285 OR9G9P0C7N8 305 aa15.58■□□□□ 0.08
COL6A1-203ENST00000466285 UBE2KP61086 200 aa15.58■□□□□ 0.08
COL6A1-203ENST00000466285 RPEL1Q2QD12 228 aa15.58■□□□□ 0.08
COL6A1-203ENST00000466285 ACOT12Q8WYK0 555 aa15.58■□□□□ 0.08
COL6A1-203ENST00000466285 RAB22AQ9UL26 194 aa15.58■□□□□ 0.08
COL6A1-203ENST00000466285 DMRT1Q9Y5R6 373 aa15.58■□□□□ 0.08
COL6A1-203ENST00000466285 A0A1B0GW64 132 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 PPP5D1E7EU14 171 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 HLA-AP01891 365 aaKnown RBP15.57■□□□□ 0.08
COL6A1-203ENST00000466285 CD7P09564 240 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 AADACP22760 399 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 RPL30P62888 115 aaKnown RBP15.57■□□□□ 0.08
COL6A1-203ENST00000466285 RTL8BQ17RB0 113 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 CD300EQ496F6 205 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-203ENST00000466285 LINC00322Q6ZN03 302 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-203ENST00000466285 VKORC1L1Q8N0U8 176 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 TPRKBQ9Y3C4 175 aa15.57■□□□□ 0.08
COL6A1-203ENST00000466285 TRBV9A0A0B4J1U6 114 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 IGKV1D-13A0A0B4J2D9 117 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 H0Y980 276 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 OR2A4O95047 310 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 IGLV2-14P01704 120 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 IGKV1-13P0DP09 117 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 PSMA1P25786 263 aaKnown RBP15.56■□□□□ 0.08
COL6A1-203ENST00000466285 TRAM1Q15629 374 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms