RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 K7EM74 188 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 CLN5O75503 358 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 WDR25Q64LD2 544 aaPredicted RBP13.61□□□□□ -0.23
SLX4-202ENST00000466154 SEM1Q6ZVN7 128 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 LURAP1LQ8IV03 231 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 VAX2Q9UIW0 290 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 TRAV38-1A0A0B4J264 116 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 CLDN14O95500 239 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 RNF224P0DH78 156 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 CD82P27701 267 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 PIP4P1Q86T03 277 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 PSMG3Q9BT73 122 aaPredicted RBP13.61□□□□□ -0.23
SLX4-202ENST00000466154 TMEM147Q9BVK8 224 aa13.61□□□□□ -0.23
SLX4-202ENST00000466154 PATZ1Q9HBE1 687 aaKnown RBP13.61□□□□□ -0.23
SLX4-202ENST00000466154 CISD1Q9NZ45 108 aaKnown RBP13.61□□□□□ -0.23
SLX4-202ENST00000466154 YLPM1P49750 1951 aaKnown RBP13.61□□□□□ -0.23
SLX4-202ENST00000466154 UBE2CO00762 179 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 FAM27E3Q08E93 113 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 GUSBP1Q15486 140 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 CA5BP1Q8WTZ4 195 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 AHRRA9YTQ3 701 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 SLC31A2O15432 143 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 KITLGP21583 273 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 RTP5Q14D33 572 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 ZNF474Q6S9Z5 364 aaPredicted RBP13.6□□□□□ -0.23
SLX4-202ENST00000466154 ZCCHC24Q8N2G6 241 aaKnown RBP13.6□□□□□ -0.23
SLX4-202ENST00000466154 GCSAMQ8N6F7 178 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 ZBTB34Q8NCN2 500 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 PINX1Q96BK5 328 aaKnown RBP13.6□□□□□ -0.23
SLX4-202ENST00000466154 APC2O95996 2303 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 PAGE4O60829 102 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 CYB5R3P00387 301 aaPredicted RBP13.6□□□□□ -0.23
SLX4-202ENST00000466154 PSMB3P49720 205 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
SLX4-202ENST00000466154 CST9LP1Q5W188 147 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 MRGPRGQ86SM5 289 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 ABHD12Q8N2K0 398 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
SLX4-202ENST00000466154 RAB24Q969Q5 203 aa13.6□□□□□ -0.23
SLX4-202ENST00000466154 ZNF134P52741 427 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 TGIF2LYQ8IUE0 185 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 DOK5Q9P104 306 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 SLC25A15Q9Y619 301 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 ZNF292O60281 2723 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 KLK10O43240 276 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 COL8A2P25067 703 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 ERVK-16P61578 105 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 FAM210BQ96KR6 192 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 HSD17B10Q99714 261 aaKnown RBP13.59□□□□□ -0.23
SLX4-202ENST00000466154 NPCDR1Q9BY65 106 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 SPTA1P02549 2419 aa13.59□□□□□ -0.23
SLX4-202ENST00000466154 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.23
SLX4-202ENST00000466154 MEF2BQ02080 365 aaPredicted RBP13.58□□□□□ -0.23
SLX4-202ENST00000466154 GFI1BQ5VTD9 330 aa13.58□□□□□ -0.23
SLX4-202ENST00000466154 LURAP1Q96LR2 239 aa13.58□□□□□ -0.23
SLX4-202ENST00000466154 AGMATQ9BSE5 352 aa13.58□□□□□ -0.23
SLX4-202ENST00000466154 GSN-AS1Q9NRJ2 163 aa13.58□□□□□ -0.23
SLX4-202ENST00000466154 ZGRF1Q86YA3 2104 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 NBASA2RRP1 2371 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 PROP1O75360 226 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 P2RY6Q15077 328 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 MORN2Q502X0 79 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 CYB5R2Q6BCY4 276 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 C1orf162Q8NEQ5 155 aaPredicted RBP13.58□□□□□ -0.24
SLX4-202ENST00000466154 MBD3L1Q8WWY6 194 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 EDARADDQ8WWZ3 215 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 SNRNP40Q96DI7 357 aaKnown RBP13.58□□□□□ -0.24
SLX4-202ENST00000466154 S1PR3Q99500 378 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 ZNRD1Q9P1U0 126 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 GAB2Q9UQC2 676 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 C15orf65H3BRN8 121 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 RAB29O14966 203 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
SLX4-202ENST00000466154 DUTP33316 252 aaKnown RBP13.58□□□□□ -0.24
SLX4-202ENST00000466154 CD81P60033 236 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
SLX4-202ENST00000466154 ARFGEF3Q5TH69 2177 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 LYG1Q8N1E2 194 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 DCAF16Q9NXF7 216 aa13.58□□□□□ -0.24
SLX4-202ENST00000466154 METTL1Q9UBP6 276 aaKnown RBP13.58□□□□□ -0.24
SLX4-202ENST00000466154 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
SLX4-202ENST00000466154 MYOD1P15172 320 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 HNF1AP20823 631 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 EIF2S3P41091 472 aaKnown RBP13.57□□□□□ -0.24
SLX4-202ENST00000466154 C22orf34Q6ZV56 151 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 PPP1R35Q8TAP8 253 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 SSMEM1Q8WWF3 244 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 ACTR3CQ9C0K3 210 aaPredicted RBP13.57□□□□□ -0.24
SLX4-202ENST00000466154 CEP295Q9C0D2 2601 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 CLDN34H7C241 214 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 IFNL4K9M1U5 179 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 PPIHO43447 177 aaKnown RBP13.57□□□□□ -0.24
SLX4-202ENST00000466154 IGLV1-44P01699 117 aa13.57□□□□□ -0.24
SLX4-202ENST00000466154 S100A8P05109 93 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms