RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZNF580Q9UK33 172 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TRRAPQ9Y4A5 3859 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FABP12A6NFH5 140 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ADARB2-AS1A8MUL3 147 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 M0QYG6 137 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SPDEFO95238 335 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CD3DP04234 171 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 HERV-K104P61576 105 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SSBP1Q04837 148 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FOXB2Q5VYV0 432 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZNF818PQ6ZRF7 136 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 KCTD9Q7L273 389 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZNF329Q86UD4 541 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TMEM229BQ8NBD8 167 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 OR51J1Q9H342 316 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TAS2R8Q9NYW2 309 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PRELID3BQ9Y3B1 194 aa12.12□□□□□ -0.47
RAB11FIP3-208ENST00000464263 M0QZ24 198 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SHOXO15266 292 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TNFSF12O43508 249 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SLC25A17O43808 307 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FCGR3BO75015 233 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CRYZL1O95825 349 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TSPAN5P62079 268 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CX3CL1P78423 397 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CBX3Q13185 183 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PLGLAQ15195 96 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TMEM17Q86X19 198 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 OSR1Q8TAX0 266 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TCTEX1D2Q8WW35 142 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TINAGL1Q9GZM7 467 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FXYD6Q9H0Q3 95 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TPSG1Q9NRR2 321 aa12.11□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ATP6V0E1O15342 81 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CD74P04233 296 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TBPP20226 339 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SLC35B1P78383 322 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 NDPQ00604 133 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CFHR3Q02985 330 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 MRGPRG-AS1Q2M3A8 158 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 AADACL3Q5VUY0 350 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZNF562Q6V9R5 426 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 NDUFA11Q86Y39 141 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FBXO7Q9Y3I1 522 aa12.1□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TCRBV4S1A1TA0A5B7 111 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PGLYRP1O75594 196 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CRIP2P52943 208 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 UCP3P55916 312 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TAS2R19P59542 299 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 UBE2KP61086 200 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CCDC190Q86UF4 302 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 OR4D10Q8NGI6 311 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PKD1L1Q8TDX9 2849 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TNCP24821 2201 aa12.09□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CMYA5Q8N3K9 4069 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 G3V318 75 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ARPC1BO15143 372 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RAB3DO95716 219 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TSPAN15O95858 294 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CA2P00918 260 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 IFNA6P05013 189 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CSF1P09603 554 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 S100A5P33763 92 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 C2orf68Q2NKX9 166 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 C19orf54Q5BKX5 351 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 LPCAT3Q6P1A2 487 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ARRDC1Q8N5I2 433 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RSRP1Q9BUV0 290 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PARP11Q9NR21 331 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 V9GYH0 126 aa12.08□□□□□ -0.48
RAB11FIP3-208ENST00000464263 GPR31O00270 319 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms