RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 METTL1Q9UBP6 276 aaKnown RBP13.87□□□□□ -0.19
VPS52-214ENST00000463486 MTFP1Q9UDX5 166 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 TCRBV4S1A1TA0A5B7 111 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 G3V318 75 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 SLC25A17O43808 307 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 IGHG4P01861 327 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 RRASP10301 218 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 RCVRNP35243 200 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 PJVKQ0ZLH3 352 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 RTL8BQ17RB0 113 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 NSUN5P1Q3KNT7 163 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 ZNF562Q6V9R5 426 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 ZNF66Q6ZN08 573 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 ZNF818PQ6ZRF7 136 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 MINDY2Q8NBR6 621 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 OR4X2Q8NGF9 303 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 OR5H2Q8NGV7 314 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 MOB3AQ96BX8 217 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 HSD17B10Q99714 261 aaKnown RBP13.86□□□□□ -0.19
VPS52-214ENST00000463486 SLC5A7Q9GZV3 580 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 TSSC4Q9Y5U2 329 aaPredicted RBP13.86□□□□□ -0.19
VPS52-214ENST00000463486 NUBP2Q9Y5Y2 271 aa13.86□□□□□ -0.19
VPS52-214ENST00000463486 DNAH3Q8TD57 4116 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 ARPC1BO15143 372 aaKnown RBP13.85□□□□□ -0.19
VPS52-214ENST00000463486 NOL3O60936 208 aaKnown RBP13.85□□□□□ -0.19
VPS52-214ENST00000463486 CRYZL1O95825 349 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 TNFSF8P32971 234 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 FXYD4P59646 89 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 DGCR2P98153 550 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 KCTD9Q7L273 389 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 ZBTB34Q8NCN2 500 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 FAM110DQ8TAY7 271 aaPredicted RBP13.85□□□□□ -0.19
VPS52-214ENST00000463486 HARBI1Q96MB7 349 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 ZNF2Q9BSG1 426 aaPredicted RBP13.85□□□□□ -0.19
VPS52-214ENST00000463486 TAS2R8Q9NYW2 309 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 RSL24D1Q9UHA3 163 aaKnown RBP13.85□□□□□ -0.19
VPS52-214ENST00000463486 WSB1Q9Y6I7 421 aa13.85□□□□□ -0.19
VPS52-214ENST00000463486 FCGR3BO75015 233 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 IGLV1-40P01703 118 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 PSMB8P28062 276 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 UBE2KP61086 200 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 SLC35B1P78383 322 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 KIAA0141Q14154 515 aaPredicted RBP13.84□□□□□ -0.19
VPS52-214ENST00000463486 VAX1Q5SQQ9 334 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 TEX38Q6PEX7 206 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 LCNL1Q6ZST4 164 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 C18orf65Q6ZTR6 163 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 PPP1R27Q86WC6 154 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 COMMD1Q8N668 190 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 MCFD2Q8NI22 146 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 OSR1Q8TAX0 266 aaPredicted RBP13.84□□□□□ -0.19
VPS52-214ENST00000463486 MYOZ3Q8TDC0 251 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 DIRAS2Q96HU8 199 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 CLCC1Q96S66 551 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 GON7Q9BXV9 100 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 C6orf62Q9GZU0 229 aaPredicted RBP13.84□□□□□ -0.19
VPS52-214ENST00000463486 FXYD6Q9H0Q3 95 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 PARP11Q9NR21 331 aa13.84□□□□□ -0.19
VPS52-214ENST00000463486 A0A1W2PRX2 142 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 GABARAPH6UMI1 98 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 CTDSPLO15194 276 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 SHOXO15266 292 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 TNFSF12O43508 249 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 SOX15O60248 233 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 CA2P00918 260 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 OPN1MWP04001 364 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 RPLP1P05386 114 aaKnown RBP13.83□□□□□ -0.2
VPS52-214ENST00000463486 OPN1MW2P0DN77 364 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 OPN1MW3P0DN78 364 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 RPL23AP62750 156 aaKnown RBP13.83□□□□□ -0.2
VPS52-214ENST00000463486 FOXE3Q13461 319 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 RNASE12Q5GAN4 147 aaKnown RBP13.83□□□□□ -0.2
VPS52-214ENST00000463486 OR2B11Q5JQS5 317 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 AADACL3Q5VUY0 350 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 TMEM17Q86X19 198 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 OR6F1Q8NGZ6 308 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 DCUN1D5Q9BTE7 237 aa13.83□□□□□ -0.2
VPS52-214ENST00000463486 TINAGL1Q9GZM7 467 aaPredicted RBP13.83□□□□□ -0.2
VPS52-214ENST00000463486 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 CCDC160A6NGH7 325 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 M0QYG6 137 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 RAMP3O60896 148 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 CD74P04233 296 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 CD3DP04234 171 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 ELANEP08246 267 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 VDAC1P21796 283 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 PLGLAQ15195 96 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 PYHIN1Q6K0P9 492 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 TEX45Q8NA69 505 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 SMIM4Q8WVI0 70 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 TCTEX1D2Q8WW35 142 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 FCAMRQ8WWV6 532 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 R3HDM4Q96D70 268 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 KLK15Q9H2R5 256 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 ZFP57Q9NU63 452 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 PRELID3BQ9Y3B1 194 aa13.82□□□□□ -0.2
VPS52-214ENST00000463486 RBFOX2O43251 390 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPS52-214ENST00000463486 PGLYRP1O75594 196 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms