RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 VMA21Q3ZAQ7 101 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 C19orf54Q5BKX5 351 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 KHDC1LQ5JSQ8 128 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 DHRS11Q6UWP2 260 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 KCTD9Q7L273 389 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 TEX45Q8NA69 505 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 MINDY2Q8NBR6 621 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 OR5H2Q8NGV7 314 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 NBEAL1Q6ZS30 2694 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 SHOXO15266 292 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 IGLV2-14P01704 120 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 PTHLHP12272 177 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 UBE2KP61086 200 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 ACTBL2Q562R1 376 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 PYHIN1Q6K0P9 492 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 PPP1R27Q86WC6 154 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 TMEM68Q96MH6 324 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 LINC00527Q9UJ94 153 aa10.25□□□□□ -0.77
R3HDM1-213ENST00000463230 LINC00473A8K010 186 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 SLC25A17O43808 307 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 IGLV1-40P01703 118 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 PSMB8P28062 276 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 CDX1P47902 265 aaPredicted RBP10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 HERV-K104P61576 105 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 SPCS2Q15005 226 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 WFDC9Q8NEX5 89 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 OR4S2Q8NH73 311 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 AIFM2Q9BRQ8 373 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 SLC5A7Q9GZV3 580 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 EHFQ9NZC4 300 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 NUBP2Q9Y5Y2 271 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 PKD1L1Q8TDX9 2849 aa10.24□□□□□ -0.77
R3HDM1-213ENST00000463230 A0A1W2PRX2 142 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 MYCNOSP40205 109 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 LINC00205P59089 165 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 MRPS10P82664 201 aaKnown RBP10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 AKIRIN2Q53H80 203 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 ZNF695Q8IW36 515 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 OR5M8Q8NGP6 311 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 DYNC2LI1Q8TCX1 351 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 MEIS3P1A6NDR6 274 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 CRYZL1O95825 349 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 CA2P00918 260 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 PF4P02776 101 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 TBPP20226 339 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 SSBP1Q04837 148 aaKnown RBP10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 CATR1Q13166 79 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 TMEM65Q6PI78 240 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 SECTM1Q8WVN6 248 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 TCTEX1D2Q8WW35 142 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 ARPC1AQ92747 370 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 MOB3AQ96BX8 217 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 RBMXL1Q96E39 390 aaKnown RBP10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 EXTL2Q9UBQ6 330 aa10.23□□□□□ -0.77
R3HDM1-213ENST00000463230 NUDT19A8MXV4 375 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 EREGO14944 169 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 DUS4LO95620 317 aaKnown RBP10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 NDPQ00604 133 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 SNX29P2Q8IUI4 249 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 MFSD4AQ8N468 514 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 VSTM2AQ8TAG5 236 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 C4orf3Q8WVX3 66 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 ISOC1Q96CN7 298 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 GPR61Q9BZJ8 451 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 H3BUA1 57 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 FCN1O00602 326 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 BRI3O95415 125 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 FXYD3Q14802 87 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 VAX1Q5SQQ9 334 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 HIST2H2BDQ6DRA6 164 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 LPCAT3Q6P1A2 487 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 LYSMD2Q8IV50 215 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 KLHL30-AS1Q8NEE0 82 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 CD300LFQ8TDQ1 290 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 UBE2E2Q96LR5 201 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 WSB1Q9Y6I7 421 aa10.22□□□□□ -0.77
R3HDM1-213ENST00000463230 PLXNB1O43157 2135 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 H3BMQ9 156 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 J3QRK9 145 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 FCGR3BO75015 233 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 RPLP1P05386 114 aaKnown RBP10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 EGR2P11161 476 aaPredicted RBP10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 RPL30P62888 115 aaKnown RBP10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 RUNX1Q01196 453 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 KPRPQ5T749 579 aaPredicted RBP10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 SAMD5Q5TGI4 173 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 FOXB2Q5VYV0 432 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 OR6F1Q8NGZ6 308 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 ABHD5Q8WTS1 349 aa10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 RCC1LQ96I51 464 aaKnown RBP10.21□□□□□ -0.77
R3HDM1-213ENST00000463230 G3V318 75 aa10.21□□□□□ -0.78
R3HDM1-213ENST00000463230 ZNF701M0R085 212 aaPredicted RBP10.21□□□□□ -0.78
R3HDM1-213ENST00000463230 HRASP01112 189 aa10.21□□□□□ -0.78
R3HDM1-213ENST00000463230 PMP2P02689 132 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms