RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 HPRT1P00492 218 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 SAA2P0DJI9 122 aaPredicted RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 EFNB3Q15768 340 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 SP5Q6BEB4 398 aaPredicted RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 VKORC1L1Q8N0U8 176 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 PUSL1Q8N0Z8 303 aaKnown RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 GNPNAT1Q96EK6 184 aaPredicted RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 QTRT1Q9BXR0 403 aaKnown RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 MS4A5Q9H3V2 200 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 DYNLRB1Q9NP97 96 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 NDRG3Q9UGV2 375 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 RPUSD1Q9UJJ7 312 aaKnown RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 CARHSP1Q9Y2V2 147 aaKnown RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 DOCK11Q5JSL3 2073 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 NKX6-3A6NJ46 265 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 RBFOX2O43251 390 aaKnown RBP eCLIP8.36□□□□□ -1.072e-20■□□□□ 10.6
MSH5-211ENST00000463144 GNG10P50151 68 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 RAB7AP51149 207 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 DVL1P1P54792 670 aaPredicted RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 CCL20P78556 96 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 SPSB3Q6PJ21 355 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 SSX9Q7RTT3 188 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 THNSL2Q86YJ6 484 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 C1orf87Q8N0U7 546 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 RAB9BQ9NP90 201 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 CISD1Q9NZ45 108 aaKnown RBP8.36□□□□□ -1.07
MSH5-211ENST00000463144 CTSZQ9UBR2 303 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 FBXO7Q9Y3I1 522 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 LINC00312Q9Y6C7 94 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 NCOR2Q9Y618 2525 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 TRAV3A0A0B4J244 114 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 hADV38S2A0JD32 116 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 B9A039 149 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 UMAD1C9J7I0 102 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 DNASE2O00115 360 aaPredicted RBP8.35□□□□□ -1.07
MSH5-211ENST00000463144 PPIHO43447 177 aaKnown RBP8.35□□□□□ -1.07
MSH5-211ENST00000463144 CCL3L1P16619 93 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 OR2B8PP59922 312 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 RPL31P62899 125 aaKnown RBP8.35□□□□□ -1.07
MSH5-211ENST00000463144 MRPS11P82912 194 aaKnown RBP8.35□□□□□ -1.07
MSH5-211ENST00000463144 LY6DQ14210 128 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 AARDQ4LEZ3 155 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 LYG1Q8N1E2 194 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 DTD1Q8TEA8 209 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 S1PR3Q99500 378 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 RSG1Q9BU20 258 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 SEC11CQ9BY50 192 aa8.35□□□□□ -1.07
MSH5-211ENST00000463144 TET2Q6N021 2002 aaPredicted RBP8.35□□□□□ -1.07
MSH5-211ENST00000463144 A0A1B0GV50 99 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 GPR37O15354 613 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 NUPL2O15504 423 aaKnown RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 IFNA5P01569 189 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 SFTA3P0C7M3 94 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 LOXP28300 417 aaPredicted RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 MEF2CQ06413 473 aaPredicted RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 GUK1Q16774 197 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 LRRC75BQ2VPJ9 315 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 OR8G2PQ6IF36 304 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 SLC25A48Q6ZT89 311 aaKnown RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 COMMD1Q8N668 190 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 NKX6-2Q9C056 277 aaPredicted RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 PRORYQ9H606 182 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 PRELID3BQ9Y3B1 194 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 FAM74A7A6NL05 159 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 RPS16P62249 146 aaKnown RBP8.34□□□□□ -1.07
MSH5-211ENST00000463144 HBG1P69891 147 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 HBG2P69892 147 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 RELBQ01201 579 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 SLC38A11Q08AI6 406 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 SPTA1P02549 2419 aa8.34□□□□□ -1.07
MSH5-211ENST00000463144 IGHV1-69-2A0A0G2JMI3 117 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 FAM90A9PA6NNJ1 464 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 CEBPZOSA8MTT3 80 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 LYNX1G3V0Z9 82 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 DVL1O14640 695 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 RBMXL2O75526 392 aaKnown RBP8.33□□□□□ -1.08
MSH5-211ENST00000463144 LYNX1P0DP58 116 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 NQO2P16083 231 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 SVBPQ8N300 66 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 LILRB2Q8N423 598 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 WDR61Q9GZS3 305 aaKnown RBP8.33□□□□□ -1.08
MSH5-211ENST00000463144 VSIRQ9H7M9 311 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 CHD8Q9HCK8 2581 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 LRBAP50851 2863 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 ITPR1Q14643 2758 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 NDUFB3O43676 98 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 CT45A6P0DMU7 189 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 CT45A5P0DMU8 189 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 CT45A7P0DMV0 189 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 COL8A2P25067 703 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 KIR2DS2P43631 304 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 THBS3P49746 956 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms