RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MOB3BQ86TA1 216 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 SPAG16Q8N0X2 631 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-202ENST00000463060 LIN7CQ9NUP9 197 aaKnown RBP11.53□□□□□ -0.56
COL6A1-202ENST00000463060 SHPKQ9UHJ6 478 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 ALG5Q9Y673 324 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.56
COL6A1-202ENST00000463060 NAV3Q8IVL0 2385 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 FCGR3BO75015 233 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 VENTXO95231 258 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 IGKV1-16P04430 117 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 RRASP10301 218 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 VAMP1P23763 118 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 LPAR6P43657 344 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 AANATQ16613 207 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 DEFB112Q30KQ8 113 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 FBLN7Q53RD9 439 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 TMEM177Q53S58 311 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 DHRS7BQ6IAN0 325 aaPredicted RBP11.52□□□□□ -0.57
COL6A1-202ENST00000463060 CLEC9AQ6UXN8 241 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 IL17RELQ6ZVW7 336 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 THNSL2Q86YJ6 484 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 PDPNQ86YL7 162 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 SLC35D1Q9NTN3 355 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 PRR13Q9NZ81 148 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.57
COL6A1-202ENST00000463060 IGHV3-72A0A0B4J1Y9 119 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 FBP1P09467 338 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 RPA2P15927 270 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 OR2B11Q5JQS5 317 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 C11orf88Q6PI97 169 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 SELENOHQ8IZQ5 122 aaKnown RBP11.51□□□□□ -0.57
COL6A1-202ENST00000463060 CADM3Q8N126 398 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 Q8N6K4 173 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 CASTOR1Q8WTX7 329 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 IL22RA2Q969J5 263 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 RITA1Q96K30 269 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 ZNF48Q96MX3 618 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-202ENST00000463060 MS4A7Q9GZW8 240 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-202ENST00000463060 OR51J1Q9H342 316 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 PLEKHA2Q9HB19 425 aa11.51□□□□□ -0.57
COL6A1-202ENST00000463060 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-202ENST00000463060 A0A1B0GVG6 124 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 SRRM4A7MD48 611 aaKnown RBP11.5□□□□□ -0.57
COL6A1-202ENST00000463060 CREBL2O60519 120 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-202ENST00000463060 S1PR2O95136 353 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 HPRT1P00492 218 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 APOA2P02652 100 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 SERPINE2P07093 398 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-202ENST00000463060 P0C879 139 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 ANXA3P12429 323 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 HLA-GP17693 338 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 RAB13P51153 203 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 C12orf45Q8N5I9 185 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-202ENST00000463060 SEC22AQ96IW7 307 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 RNF5Q99942 180 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 COMMD9Q9P000 198 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 FAM96BQ9Y3D0 163 aa11.5□□□□□ -0.57
COL6A1-202ENST00000463060 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 CRYZL1O95825 349 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 IGLV2-23P01705 113 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 SNRNP70P08621 437 aaKnown RBP11.49□□□□□ -0.57
COL6A1-202ENST00000463060 CD24P25063 80 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 BRS3P32247 399 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 RIPPLY3P57055 190 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 SRPXP78539 464 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 CBX3Q13185 183 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 C2orf68Q2NKX9 166 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 LIN54Q6MZP7 749 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 LYZL2Q7Z4W2 148 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 LGI3Q8N145 548 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-202ENST00000463060 C22orf15Q8WYQ4 148 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 RBPMSQ93062 196 aaKnown RBP11.49□□□□□ -0.57
COL6A1-202ENST00000463060 FLYWCH2Q96CP2 140 aaKnown RBP11.49□□□□□ -0.57
COL6A1-202ENST00000463060 EAF1Q96JC9 268 aaPredicted RBP11.49□□□□□ -0.57
COL6A1-202ENST00000463060 PLSCR3Q9NRY6 295 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 F8P00451 2351 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 HIVEP2P31629 2446 aa11.49□□□□□ -0.57
COL6A1-202ENST00000463060 H7C2Y5 167 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 MOSP00540 346 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 HNF1AP20823 631 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 IER3P46695 156 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 LGALS7P47929 136 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 ARHGDIBP52566 201 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 LRRC75BQ2VPJ9 315 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 NMSQ5H8A3 153 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 TMEM268Q5VZI3 342 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 Q6YL49 198 aa11.48□□□□□ -0.57
COL6A1-202ENST00000463060 NPBQ8NG41 125 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms