RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 FAM103A1Q9BTL3 118 aaKnown RBP5.63□□□□□ -1.51
PTPRF-210ENST00000463041 ST6GALNAC5Q9BVH7 336 aa5.63□□□□□ -1.51
PTPRF-210ENST00000463041 ZNF355PQ9NSJ1 428 aa5.63□□□□□ -1.51
PTPRF-210ENST00000463041 ZNF256Q9Y2P7 627 aaPredicted RBP5.63□□□□□ -1.51
PTPRF-210ENST00000463041 C13orf42A0A1B0GVH6 325 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 SRRM4A7MD48 611 aaKnown RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 TMEM127O75204 238 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 HLA-DQB1P01920 261 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 TRGV3P03979 118 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 DUTP33316 252 aaKnown RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 SDC2P34741 201 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 TPPP2P59282 170 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 UBE2KP61086 200 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 PJVKQ0ZLH3 352 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 VMA21Q3ZAQ7 101 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 ACSM6Q6P461 480 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 POC5Q8NA72 575 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 GRPEL2Q8TAA5 225 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 OSR1Q8TAX0 266 aaPredicted RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 CASTOR1Q8WTX7 329 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 DDB2Q92466 427 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 USMG5Q96IX5 58 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 HARBI1Q96MB7 349 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 PRR25Q96S07 402 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 ALX4Q9H161 411 aaPredicted RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 OR51E2Q9H255 320 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 RANGRFQ9HD47 186 aaPredicted RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 DAPK2Q9UIK4 370 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 ELF5Q9UKW6 265 aaPredicted RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 PRELID3BQ9Y3B1 194 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 RRP15Q9Y3B9 282 aaKnown RBP5.62□□□□□ -1.51
PTPRF-210ENST00000463041 OR2W1Q9Y3N9 320 aa5.62□□□□□ -1.51
PTPRF-210ENST00000463041 IGHV4OR15-8A0A075B7B6 117 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 IGKV1D-8A0A087WSZ0 117 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 A0A087WW49 117 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 A0A0A6YYH2 397 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SMIM30A4D0T7 59 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 MSGN1A6NI15 193 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 A6NJ64 397 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 LINC00473A8K010 186 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SAP30O75446 220 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 LY86O95711 162 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 IGHV3-11P01762 117 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SNRPBP14678 240 aaKnown RBP5.61□□□□□ -1.51
PTPRF-210ENST00000463041 ZP3P21754 424 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 AADACP22760 399 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SLURP1P55000 103 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 GNG2P59768 71 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SSBP2P81877 361 aaPredicted RBP5.61□□□□□ -1.51
PTPRF-210ENST00000463041 PRSS8Q16651 343 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 TATDN3Q17R31 274 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 C11orf87Q6NUJ2 197 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SFXN4Q6P4A7 337 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 ZNF645Q8N7E2 425 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 OR6Q1Q8NGQ2 317 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 C5orf30Q96GV9 206 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 OR4C12Q96R67 309 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 DCUN1D5Q9BTE7 237 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 TINAGL1Q9GZM7 467 aaPredicted RBP5.61□□□□□ -1.51
PTPRF-210ENST00000463041 DIABLOQ9NR28 239 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 RHBDL2Q9NX52 303 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 ANXA10Q9UJ72 324 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 ETV7Q9Y603 341 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 SMAD5-AS1Q9Y6J3 95 aa5.61□□□□□ -1.51
PTPRF-210ENST00000463041 HUWE1Q7Z6Z7 4374 aaKnown RBP5.61□□□□□ -1.51
PTPRF-210ENST00000463041 TRAV18A0A075B6X5 111 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 TMEM235A6NFC5 223 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 J3QRK9 145 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 CREBL2O60519 120 aaPredicted RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 TUSC2O75896 110 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 ACTL6BO94805 426 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 CRYZL1O95825 349 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 CD36P16671 472 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 NFYAP23511 347 aaPredicted RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 MXD1Q05195 221 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 KLF5Q13887 457 aaPredicted RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 CDK10Q15131 360 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 MRGPRG-AS1Q2M3A8 158 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 KCTD21Q4G0X4 260 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 ZNF343Q6P1L6 599 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 SLC25A42Q86VD7 318 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 CROCCP3Q8IVE0 287 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 MMD2Q8IY49 270 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 PHB2Q99623 299 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 HSD17B10Q99714 261 aaKnown RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 SPIN2AQ99865 258 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 SPIN2BQ9BPZ2 258 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 AIFM2Q9BRQ8 373 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 PEF1Q9UBV8 284 aaKnown RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 MRPS7Q9Y2R9 242 aaKnown RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 RBMX2Q9Y388 322 aaKnown RBP5.6□□□□□ -1.51
PTPRF-210ENST00000463041 U3KQK5 164 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 DNAH7Q8WXX0 4024 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 NBEAL2Q6ZNJ1 2754 aa5.6□□□□□ -1.51
PTPRF-210ENST00000463041 KMT2CQ8NEZ4 4911 aaKnown RBP5.59□□□□□ -1.51
PTPRF-210ENST00000463041 STAB2Q8WWQ8 2551 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 LOC100506127A0A0U1RQW1 187 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 ANKRD34BA5PLL1 514 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms