RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 TMED9Q9BVK6 235 aa8.45□□□□□ -1.06
PTPN7-204ENST00000462815 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
PTPN7-204ENST00000462815 NAA50Q9GZZ1 169 aaKnown RBP8.45□□□□□ -1.06
PTPN7-204ENST00000462815 RBM38Q9H0Z9 239 aaKnown RBP8.45□□□□□ -1.06
PTPN7-204ENST00000462815 OR51E2Q9H255 320 aa8.45□□□□□ -1.06
PTPN7-204ENST00000462815 Q9N2K0 584 aa8.45□□□□□ -1.06
PTPN7-204ENST00000462815 CEPT1Q9Y6K0 416 aa8.45□□□□□ -1.06
PTPN7-204ENST00000462815 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 C13orf42A0A1B0GVH6 325 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 H0Y980 276 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 GALP22466 123 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 ZBTB25P24278 435 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 FGF9P31371 208 aaPredicted RBP8.44□□□□□ -1.06
PTPN7-204ENST00000462815 ACSM3Q53FZ2 586 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 GPR107Q5VW38 600 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 Q8N402 240 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 FAM110AQ9BQ89 295 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 RIMS4Q9H426 269 aaPredicted RBP8.44□□□□□ -1.06
PTPN7-204ENST00000462815 CHMP1AQ9HD42 196 aaPredicted RBP8.44□□□□□ -1.06
PTPN7-204ENST00000462815 PEF1Q9UBV8 284 aaKnown RBP8.44□□□□□ -1.06
PTPN7-204ENST00000462815 HSF4Q9ULV5 492 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 DMRT1Q9Y5R6 373 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 VPS13DQ5THJ4 4388 aa8.44□□□□□ -1.06
PTPN7-204ENST00000462815 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 RBMY1BA6NDE4 496 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 RBMY1EA6NEQ0 496 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF785A8K8V0 405 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 BMPR1BO00238 502 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 JTBO76095 146 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 OR2A4O95047 310 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 BPNT1O95861 308 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 UCHL1P09936 223 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 RBMY1DP0C7P1 496 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 SRMP19623 302 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 PSMA1P25786 263 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 CD40LGP29965 261 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 RPS16P62249 146 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF45Q02386 682 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 CTF1Q16619 201 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 PLAC9Q5JTB6 97 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 GLT8D1Q68CQ7 371 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 LCN12Q6JVE5 192 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 CEACAM19Q7Z692 300 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 CLVS1Q8IUQ0 354 aaPredicted RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 ADAD2Q8NCV1 583 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 BVESQ8NE79 360 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 SETD6Q8TBK2 473 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 DDB2Q92466 427 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 TMEM68Q96MH6 324 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 CENPOQ9BU64 300 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 RNF167Q9H6Y7 350 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 C12orf4Q9NQ89 552 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 SLC35D1Q9NTN3 355 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 PLEKHJ1Q9NW61 149 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 TXNL4BQ9NX01 149 aaKnown RBP8.43□□□□□ -1.06
PTPN7-204ENST00000462815 RDH8Q9NYR8 311 aa8.43□□□□□ -1.06
PTPN7-204ENST00000462815 TRBV9A0A0B4J1U6 114 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 SMIM31A0A1B0GVY4 71 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 SHISA3A0PJX4 238 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 M0R1X1 148 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 AIREO43918 545 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 GABARAPO95166 117 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 CD3GP09693 182 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 EDN2P20800 178 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 AADACP22760 399 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 TGFBR1P36897 503 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 TMBIM6P55061 237 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 PLA2G7Q13093 441 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 TMEM177Q53S58 311 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 OR6M1Q8NGM8 313 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 ARHGAP5-AS1Q96IT6 56 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 USMG5Q96IX5 58 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 PECRQ9BY49 303 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 PLEKHA3Q9HB20 300 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 ZC4H2Q9NQZ6 224 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 BATF3Q9NR55 127 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF355PQ9NSJ1 428 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 SDHAF2Q9NX18 166 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 NDUFA13Q9P0J0 144 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF230Q9UIE0 474 aaPredicted RBP8.42□□□□□ -1.06
PTPN7-204ENST00000462815 MGAT4AQ9UM21 535 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 SSR3Q9UNL2 185 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 KCNK7Q9Y2U2 307 aa8.42□□□□□ -1.06
PTPN7-204ENST00000462815 SLC17A2O00624 439 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 APOA2P02652 100 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 IFNA6P05013 189 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 CD7P09564 240 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 LGALS7P47929 136 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 LSM3P62310 102 aaKnown RBP8.41□□□□□ -1.06
PTPN7-204ENST00000462815 P2RY14Q15391 338 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 TIMM50Q3ZCQ8 353 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 CD300EQ496F6 205 aaPredicted RBP8.41□□□□□ -1.06
PTPN7-204ENST00000462815 C22orf42Q6IC83 251 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 GTSCR1Q86UQ5 136 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 LAX1Q8IWV1 398 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 HARBI1Q96MB7 349 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms