RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MIOXQ9UGB7 285 aa14.1□□□□□ -0.15
ACTB-207ENST00000462494 IGKV1D-17A0A075B6S4 117 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 OR9G9P0C7N8 305 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 HTD2P86397 168 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 C4orf17Q53FE4 359 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 PIP4P1Q86T03 277 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 OR4F5Q8NH21 305 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 OR4F4Q96R69 305 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 MRPL37Q9BZE1 423 aaKnown RBP14.09□□□□□ -0.15
ACTB-207ENST00000462494 ACTR3CQ9C0K3 210 aaPredicted RBP14.09□□□□□ -0.15
ACTB-207ENST00000462494 TMEM242Q9NWH2 141 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 NAT8Q9UHE5 227 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 LAMA5O15230 3695 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 IFITM10A6NMD0 228 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 AHRRA9YTQ3 701 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 NKX6-1P78426 367 aaPredicted RBP14.09□□□□□ -0.15
ACTB-207ENST00000462494 MZT1Q08AG7 82 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 MSMPQ1L6U9 139 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 PDZD11Q5EBL8 140 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 TRAT1Q6PIZ9 186 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 VHLLQ6RSH7 139 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 EDARADDQ8WWZ3 215 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 RAB24Q969Q5 203 aa14.09□□□□□ -0.15
ACTB-207ENST00000462494 EP300Q09472 2414 aaPredicted RBP14.09□□□□□ -0.15
ACTB-207ENST00000462494 S100A2P29034 98 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 DUTP33316 252 aaKnown RBP14.08□□□□□ -0.16
ACTB-207ENST00000462494 RND2P52198 227 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 EDDM3BP56851 147 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 SPRNQ5BIV9 151 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 VKORC1L1Q8N0U8 176 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 NECAP1Q8NC96 275 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 ZNRF1Q8ND25 227 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 GGACTQ9BVM4 153 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
ACTB-207ENST00000462494 CACNA1GO43497 2377 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 M0R1B8 84 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 M0R1X1 148 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 PROP1O75360 226 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 CGAP01215 116 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 MDKP21741 143 aaPredicted RBP14.07□□□□□ -0.16
ACTB-207ENST00000462494 P2RY6Q15077 328 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 MORN2Q502X0 79 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 RPL39P5Q59GN2 51 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 PRAMEF5Q5TYX0 476 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 FRZBQ92765 325 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 SLC25A15Q9Y619 301 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 SMCO3A2RU48 225 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 C15orf62A8K5M9 175 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 SRRM5B3KS81 715 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 C17orf112F2Z3M2 114 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 TRGC1P0CF51 173 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 GZMHP20718 246 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 PMS2P11Q13670 270 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 GFI1BQ5VTD9 330 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 OR13D1Q8NGV5 346 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 OR2V2Q96R30 315 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 OR51M1Q9H341 326 aa14.07□□□□□ -0.16
ACTB-207ENST00000462494 GAR1Q9NY12 217 aaKnown RBP14.07□□□□□ -0.16
ACTB-207ENST00000462494 PAGE4O60829 102 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 KBTBD11O94819 623 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 OPN1MWP04001 364 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 OPN1MW2P0DN77 364 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 OPN1MW3P0DN78 364 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 GNB2P62879 340 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 SEM1Q6ZVN7 128 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 C16orf82Q7Z2V1 217 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 MOGAT3Q86VF5 341 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 OR4A16Q8NH70 328 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 ABHD5Q8WTS1 349 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 CTDSP1Q9GZU7 261 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 PARLQ9H300 379 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 PARD6AQ9NPB6 346 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 OR6C3Q9NZP0 311 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 SPRY3O43610 288 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 HPRT1P00492 218 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 IFNA10P01566 189 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 VWC2Q2TAL6 325 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 BSXQ3C1V8 233 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 CYP2G1PQ6ZSU1 146 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 GCSAMQ8N6F7 178 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 MANBALQ9NQG1 85 aa14.06□□□□□ -0.16
ACTB-207ENST00000462494 MGST3O14880 152 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 CD1BP29016 333 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 ZNF134P52741 427 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 PPP1R35Q8TAP8 253 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 LEAP2Q969E1 77 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 SNX22Q96L94 193 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 JPT1Q9UK76 154 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 PTPRBP23467 1997 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 TMEM250H0YL14 139 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 PPP1R2P9O14990 202 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 BMP5P22003 454 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 S100PP25815 95 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 CDC34P49427 236 aaPredicted RBP14.05□□□□□ -0.16
ACTB-207ENST00000462494 RPL23P62829 140 aaKnown RBP14.05□□□□□ -0.16
ACTB-207ENST00000462494 ACOT6Q3I5F7 207 aaPredicted RBP14.05□□□□□ -0.16
ACTB-207ENST00000462494 GCSAMLQ5JQS6 135 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 S100PBPQ96BU1 408 aa14.05□□□□□ -0.16
ACTB-207ENST00000462494 HEYLQ9NQ87 328 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms