RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 KIAA1456Q9P272 454 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PRNDQ9UKY0 176 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 WASHC3Q9Y3C0 194 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 USP34Q70CQ2 3546 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 FAM90A26D6RGX4 464 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 C19orf84I3L1E1 186 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 I3L521 148 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 F12P00748 615 aaPredicted RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 METTL15P1P0C7V9 234 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 SLC25A6P12236 298 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 HTR1DP28221 377 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 DUTP33316 252 aaKnown RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 BLOC1S1P78537 153 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 EWSR1Q01844 656 aaKnown RBP eCLIP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 BAXQ07812 192 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 SRSF4Q08170 494 aaKnown RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 CT45A1Q5HYN5 189 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 LAMTOR1Q6IAA8 161 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 CCDC144NLQ6NUI1 221 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 LDLRAD3Q86YD5 345 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF843Q8N446 348 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PNKDQ8N490 385 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 CT45A3Q8NHU0 189 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 DTD1Q8TEA8 209 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 RNF141Q8WVD5 230 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 C22orf15Q8WYQ4 148 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 LHX4Q969G2 390 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PINX1Q96BK5 328 aaKnown RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PERPQ96FX8 193 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 IFI27L2Q9H2X8 130 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM140Q9NV12 185 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 FKBP11Q9NYL4 201 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 CTSZQ9UBR2 303 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 FBXO7Q9Y3I1 522 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 DOPEY1Q5JWR5 2465 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 J3QR06 171 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SLC31A2O15432 143 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 KCNAB3O43448 404 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 CNIH1O95406 144 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 IGHV2-70P01814 119 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 ARG1P05089 322 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 IGHV1-8P0DP01 117 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 UBE2KP61086 200 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 RPL30P62888 115 aaKnown RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 LCN2P80188 198 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 ERHP84090 104 aaKnown RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TFF3Q07654 80 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM267Q0VDI3 215 aaPredicted RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 C17orf58Q2M2W7 97 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SPINK9Q5DT21 86 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 RPL7L1Q6DKI1 246 aaKnown RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 FAM53AQ6NSI3 398 aaPredicted RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 COMMD7Q86VX2 200 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SLC7A5P1Q8MH63 180 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM252Q8N6L7 170 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 GNPNAT1Q96EK6 184 aaPredicted RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 PHYHIPLQ96FC7 376 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 MRPL20Q9BYC9 149 aaKnown RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 MS4A7Q9GZW8 240 aaPredicted RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 IGHV3-72A0A0B4J1Y9 119 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 LEUTXA8MZ59 168 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 H0YIZ8 118 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TXNL1O43396 289 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 RAMP3O60896 148 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TSPAN15O95858 294 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 DANCRP0C864 163 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SUB1P53999 127 aaKnown RBP eCLIP3.39□□□□□ -1.872e-7■□□□□ 11.2
ATP13A3-206ENST00000461660 SPCS3P61009 180 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 GNB1P62873 340 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 AKR1C1Q04828 323 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TNFRSF9Q07011 255 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SLC38A11Q08AI6 406 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 NMSQ5H8A3 153 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 FAM74A1Q5RGS3 127 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SLC25A48Q6ZT89 311 aaKnown RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF525Q8N782 197 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 TNFRSF14Q92956 283 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 RNF126Q9BV68 326 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 FAM96BQ9Y3D0 163 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 WSB1Q9Y6I7 421 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 NAV2Q8IVL1 2488 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 RNF222A6NCQ9 220 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 MSGN1A6NI15 193 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 CYB5BO43169 146 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 NDUFS7O75251 213 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 HKR1P10072 659 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 BRS3P32247 399 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SULT1A1P50225 295 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 LOXL3P58215 753 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 IFITM2Q01629 132 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 HNF4GQ14541 408 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 PDLIM3Q53GG5 364 aaPredicted RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 CLLU1Q5K131 121 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 SP5Q6BEB4 398 aaPredicted RBP3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 CLEC9AQ6UXN8 241 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 ETV3LQ6ZN32 361 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 OR4C13Q8NGP0 309 aa3.39□□□□□ -1.87
ATP13A3-206ENST00000461660 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms