RNA–Protein interactions for RNA: ENST00000461642.2

NINL-204, Transcript of ninein like, human

TSL 3

Gene NINL, Length 594 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NINL-204	ENST00000461642	SLC25A17	O43808	307 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	ELANE	P08246	267 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	FXYD4	P59646	89 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.79	□□□□□ -0.52
NINL-204	ENST00000461642	ZNF562	Q6V9R5	426 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	KCTD9	Q7L273	389 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	OR6F1	Q8NGZ6	308 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	OSR1	Q8TAX0	266 aa	Predicted RBP	11.79	□□□□□ -0.52
NINL-204	ENST00000461642	MIXL1	Q9H2W2	232 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	CCL28	Q9NRJ3	127 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.79	□□□□□ -0.52
NINL-204	ENST00000461642	RABL2B	Q9UNT1	228 aa		11.79	□□□□□ -0.52
NINL-204	ENST00000461642	ATP6V0E1	O15342	81 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	FCGR3B	O75015	233 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	CRYZL1	O95825	349 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	IGLV2-23	P01705	113 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	HRH1	P35367	487 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.78	□□□□□ -0.52
NINL-204	ENST00000461642	FOXE3	Q13461	319 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	VMA21	Q3ZAQ7	101 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	PPP1R27	Q86WC6	154 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	LAX1	Q8IWV1	398 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	MFSD4A	Q8N468	514 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	TCTEX1D2	Q8WW35	142 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	DIRAS2	Q96HU8	199 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	CLCC1	Q96S66	551 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	ABHD1	Q96SE0	405 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.78	□□□□□ -0.52
NINL-204	ENST00000461642	DCUN1D5	Q9BTE7	237 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	SLIRP	Q9GZT3	109 aa	Known RBP	11.78	□□□□□ -0.52
NINL-204	ENST00000461642	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.78	□□□□□ -0.52
NINL-204	ENST00000461642	TAS2R8	Q9NYW2	309 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	WSB1	Q9Y6I7	421 aa		11.78	□□□□□ -0.52
NINL-204	ENST00000461642	TET2	Q6N021	2002 aa	Predicted RBP	11.77	□□□□□ -0.52
NINL-204	ENST00000461642	NOTCH3	Q9UM47	2321 aa		11.77	□□□□□ -0.52
NINL-204	ENST00000461642	TRAV41	A0A0B4J266	112 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	SRRM4	A7MD48	611 aa	Known RBP	11.77	□□□□□ -0.53
NINL-204	ENST00000461642	IGHG4	P01861	327 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	PF4V1	P10720	104 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	SLC6A1	P30531	599 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	KIR2DS2	P43631	304 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	UBE2K	P61086	200 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	TSPAN5	P62079	268 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	RPL23A	P62750	156 aa	Known RBP	11.77	□□□□□ -0.53
NINL-204	ENST00000461642	RPL30	P62888	115 aa	Known RBP	11.77	□□□□□ -0.53
NINL-204	ENST00000461642	MRPS10	P82664	201 aa	Known RBP	11.77	□□□□□ -0.53
NINL-204	ENST00000461642	CFHR3	Q02985	330 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.77	□□□□□ -0.53
NINL-204	ENST00000461642	ACTBL2	Q562R1	376 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	TMEM17	Q86X19	198 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	TCTEX1D1	Q8N7M0	179 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	TEX45	Q8NA69	505 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	OR52I2	Q8NH67	350 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	OR4S2	Q8NH73	311 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	ABHD5	Q8WTS1	349 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	FCAMR	Q8WWV6	532 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	MOB3A	Q96BX8	217 aa		11.77	□□□□□ -0.53
NINL-204	ENST00000461642	RSL24D1	Q9UHA3	163 aa	Known RBP	11.77	□□□□□ -0.53
NINL-204	ENST00000461642		G3V318	75 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	ZNF701	M0R085	212 aa	Predicted RBP	11.76	□□□□□ -0.53
NINL-204	ENST00000461642	CA2	P00918	260 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	CRYGB	P07316	175 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	CRIP2	P52943	208 aa	Predicted RBP	11.76	□□□□□ -0.53
NINL-204	ENST00000461642	CATR1	Q13166	79 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	FXYD3	Q14802	87 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	PYHIN1	Q6K0P9	492 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	RNF152	Q8N8N0	203 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	MCFD2	Q8NI22	146 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	KLK11	Q9UBX7	282 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	MTFP1	Q9UDX5	166 aa		11.76	□□□□□ -0.53
NINL-204	ENST00000461642	GABARAP	H6UMI1	98 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	TNFSF12	O43508	249 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	CREBL2	O60519	120 aa	Predicted RBP	11.75	□□□□□ -0.53
NINL-204	ENST00000461642	CNIH1	O95406	144 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	IFNA6	P05013	189 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	TBP	P20226	339 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	PPIF	P30405	207 aa	Known RBP	11.75	□□□□□ -0.53
NINL-204	ENST00000461642	GNRHR	P30968	328 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	NDP	Q00604	133 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	SSBP1	Q04837	148 aa	Known RBP	11.75	□□□□□ -0.53
NINL-204	ENST00000461642	ECSCR	Q19T08	205 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	AKIRIN2	Q53H80	203 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	RNASE12	Q5GAN4	147 aa	Known RBP	11.75	□□□□□ -0.53
NINL-204	ENST00000461642	OR2B11	Q5JQS5	317 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	VAX1	Q5SQQ9	334 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	LPCAT3	Q6P1A2	487 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	TMEM65	Q6PI78	240 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	ZNF818P	Q6ZRF7	136 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	CMTM1	Q8IZ96	169 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	MINDY2	Q8NBR6	621 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	ARPC1A	Q92747	370 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	AIFM2	Q9BRQ8	373 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	RBM38	Q9H0Z9	239 aa	Known RBP	11.75	□□□□□ -0.53
NINL-204	ENST00000461642	TPSG1	Q9NRR2	321 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	NUBP2	Q9Y5Y2	271 aa		11.75	□□□□□ -0.53
NINL-204	ENST00000461642	NUDT19	A8MXV4	375 aa		11.74	□□□□□ -0.53
NINL-204	ENST00000461642	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	4e-7	■■■■□ 26
NINL-204	ENST00000461642	RPLP1	P05386	114 aa	Known RBP	11.74	□□□□□ -0.53
NINL-204	ENST00000461642	EGR2	P11161	476 aa	Predicted RBP	11.74	□□□□□ -0.53
NINL-204	ENST00000461642	PSMB8	P28062	276 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms