RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 TRAV41A0A0B4J266 112 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 M0R1X1 148 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 FCN1O00602 326 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 DUS4LO95620 317 aaKnown RBP13.61□□□□□ -0.23
MRPL28-207ENST00000461550 HLA-DQB1P01920 261 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 OR5H8P0DN80 308 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 DTYMKP23919 212 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 PPIFP30405 207 aaKnown RBP13.61□□□□□ -0.23
MRPL28-207ENST00000461550 CDX1P47902 265 aaPredicted RBP13.61□□□□□ -0.23
MRPL28-207ENST00000461550 ECSCRQ19T08 205 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 SNX29P2Q8IUI4 249 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 GVQW1Q8N7I0 195 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 CLCC1Q96S66 551 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 CABLES2Q9BTV7 478 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 ZNF580Q9UK33 172 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 OR8U9P0C7N5 309 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 TNFSF8P32971 234 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 MC5RP33032 325 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 S100A5P33763 92 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 CX3CL1P78423 397 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 KIR2DS1Q14954 304 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 OR8U1Q8NH10 309 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 OR10J5Q8NHC4 309 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 ABHD5Q8WTS1 349 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 CASTOR1Q8WTX7 329 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 OR5B12Q96R08 314 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 OR2D2Q9H210 308 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 GHITMQ9H3K2 345 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 GAB2Q9UQC2 676 aa13.61□□□□□ -0.23
MRPL28-207ENST00000461550 TRBV6-7A0A0A0MS04 114 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 WI2-2373I1.2A0A1W2PRP0 233 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 J3QRK9 145 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 K7EIL1 84 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 CNIH2Q6PI25 160 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 TMEM65Q6PI78 240 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 C4orf3Q8WVX3 66 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 C5orf30Q96GV9 206 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 FAM103A1Q9BTL3 118 aaKnown RBP13.6□□□□□ -0.23
MRPL28-207ENST00000461550 GNB4Q9HAV0 340 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 TPSG1Q9NRR2 321 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 METTL1Q9UBP6 276 aaKnown RBP13.6□□□□□ -0.23
MRPL28-207ENST00000461550 ADAM30Q9UKF2 790 aa13.6□□□□□ -0.23
MRPL28-207ENST00000461550 RBBP9O75884 186 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 IGLV1-40P01703 118 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 PRSS3P35030 304 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 RPS16P62249 146 aaKnown RBP13.59□□□□□ -0.23
MRPL28-207ENST00000461550 PSG5Q15238 335 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 RNASE12Q5GAN4 147 aaKnown RBP13.59□□□□□ -0.23
MRPL28-207ENST00000461550 MYOZ3Q8TDC0 251 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 DIRAS2Q96HU8 199 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 GINS4Q9BRT9 223 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 SDHAF2Q9NX18 166 aa13.59□□□□□ -0.23
MRPL28-207ENST00000461550 A0A1W2PN81 502 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 SOX15O60248 233 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 APOA2P02652 100 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-207ENST00000461550 CD40LGP29965 261 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 CHRNA7P36544 502 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 LUMP51884 338 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-207ENST00000461550 EGFEM1PQ0D2K5 195 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-207ENST00000461550 SRSF7Q16629 238 aaKnown RBP eCLIP13.58□□□□□ -0.24
MRPL28-207ENST00000461550 NDUFA5Q16718 116 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 Q6ZS49 121 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 CCDC190Q86UF4 302 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 HOGA1Q86XE5 327 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 DPF1Q92782 380 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 TOLLIPQ9H0E2 274 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 SLC35D1Q9NTN3 355 aa13.58□□□□□ -0.24
MRPL28-207ENST00000461550 SLC25A17O43808 307 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 EIF2B2P49770 351 aaKnown RBP13.57□□□□□ -0.24
MRPL28-207ENST00000461550 C19orf54Q5BKX5 351 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 ZNF660Q6AZW8 331 aaPredicted RBP13.57□□□□□ -0.24
MRPL28-207ENST00000461550 PDPNQ86YL7 162 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 MFSD4AQ8N468 514 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 ZNF491Q8N8L2 437 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.57□□□□□ -0.24
MRPL28-207ENST00000461550 BEST4Q8NFU0 473 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 OR11H1Q8NG94 326 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 CHAC2Q8WUX2 184 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 ABHD1Q96SE0 405 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 MCRIP2Q9BUT9 160 aaKnown RBP13.57□□□□□ -0.24
MRPL28-207ENST00000461550 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 IFT46Q9NQC8 304 aa13.57□□□□□ -0.24
MRPL28-207ENST00000461550 RBM7Q9Y580 266 aaKnown RBP13.57□□□□□ -0.24
MRPL28-207ENST00000461550 COL7A1Q02388 2944 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 CA2P00918 260 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 S100A1P23297 94 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 RAB9AP51151 201 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 GNB1P62873 340 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 FLYWCH2Q96CP2 140 aaKnown RBP13.56□□□□□ -0.24
MRPL28-207ENST00000461550 TSNAXQ99598 290 aaKnown RBP13.56□□□□□ -0.24
MRPL28-207ENST00000461550 RNF5Q99942 180 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 ALX4Q9H161 411 aaPredicted RBP13.56□□□□□ -0.24
MRPL28-207ENST00000461550 ANXA10Q9UJ72 324 aa13.56□□□□□ -0.24
MRPL28-207ENST00000461550 FOXA2Q9Y261 457 aaPredicted RBP13.56□□□□□ -0.24
MRPL28-207ENST00000461550 CBX5P45973 191 aa13.55□□□□□ -0.24
MRPL28-207ENST00000461550 CRIP2P52943 208 aaPredicted RBP13.55□□□□□ -0.24
MRPL28-207ENST00000461550 ARPC4P59998 168 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms