RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CNIH1O95406 144 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 EIF4EP06730 217 aaKnown RBP12.02□□□□□ -0.49
VARS-219ENST00000461328 IGKV1-13P0DP09 117 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 PSMB8P28062 276 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 FCGR2CP31995 323 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.49
VARS-219ENST00000461328 RORCP51449 518 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 DEFB136Q30KP8 78 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 VMA21Q3ZAQ7 101 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 OR2B11Q5JQS5 317 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 UNQ5815/PRO19632Q6UWF5 114 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 PPP1R27Q86WC6 154 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 SECTM1Q8WVN6 248 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 TCTEX1D2Q8WW35 142 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 ACOT12Q8WYK0 555 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 P2RX4Q99571 388 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
VARS-219ENST00000461328 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
VARS-219ENST00000461328 RBMX2Q9Y388 322 aaKnown RBP12.02□□□□□ -0.49
VARS-219ENST00000461328 LINC00473A8K010 186 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 CCL24O00175 119 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 FCGR3BO75015 233 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 AADACP22760 399 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 PPIFP30405 207 aaKnown RBP12.01□□□□□ -0.49
VARS-219ENST00000461328 FXYD4P59646 89 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 FXYD3Q14802 87 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 CDK10Q15131 360 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 ACTBL2Q562R1 376 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 MZT2AQ6P582 158 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 TCTEX1D1Q8N7M0 179 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 C4orf3Q8WVX3 66 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 AP3S1Q92572 193 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 SNAPC3Q92966 411 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 RAX2Q96IS3 184 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 TAS2R8Q9NYW2 309 aa12.01□□□□□ -0.49
VARS-219ENST00000461328 FAM25AB3EWG3 89 aa12□□□□□ -0.49
VARS-219ENST00000461328 FAM25CB3EWG5 89 aa12□□□□□ -0.49
VARS-219ENST00000461328 FAM25GB3EWG6 89 aa12□□□□□ -0.49
VARS-219ENST00000461328 PPYP01298 95 aa12□□□□□ -0.49
VARS-219ENST00000461328 IGLV2-23P01705 113 aa12□□□□□ -0.49
VARS-219ENST00000461328 APOA1P02647 267 aa12□□□□□ -0.49
VARS-219ENST00000461328 CD40LGP29965 261 aa12□□□□□ -0.49
VARS-219ENST00000461328 HOXD3P31249 432 aaPredicted RBP12□□□□□ -0.49
VARS-219ENST00000461328 PRSS3P35030 304 aa12□□□□□ -0.49
VARS-219ENST00000461328 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
VARS-219ENST00000461328 HERV-K104P61576 105 aa12□□□□□ -0.49
VARS-219ENST00000461328 CTF1Q16619 201 aa12□□□□□ -0.49
VARS-219ENST00000461328 MINDY2Q8NBR6 621 aa12□□□□□ -0.49
VARS-219ENST00000461328 LFNGQ8NES3 379 aa12□□□□□ -0.49
VARS-219ENST00000461328 OR5AP2Q8NGF4 316 aa12□□□□□ -0.49
VARS-219ENST00000461328 DDB2Q92466 427 aa12□□□□□ -0.49
VARS-219ENST00000461328 OR5B12Q96R08 314 aa12□□□□□ -0.49
VARS-219ENST00000461328 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
VARS-219ENST00000461328 KLK15Q9H2R5 256 aa12□□□□□ -0.49
VARS-219ENST00000461328 EHFQ9NZC4 300 aa12□□□□□ -0.49
VARS-219ENST00000461328 VSIG4Q9Y279 399 aa12□□□□□ -0.49
VARS-219ENST00000461328 HPGDSO60760 199 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 UBE2KP61086 200 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 PYHIN1Q6K0P9 492 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 TMEM17Q86X19 198 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 SNX29P2Q8IUI4 249 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 OR5H2Q8NGV7 314 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 OSR1Q8TAX0 266 aaPredicted RBP11.99□□□□□ -0.49
VARS-219ENST00000461328 CASTOR1Q8WTX7 329 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 PHB2Q99623 299 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 SLC5A7Q9GZV3 580 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 ZNF355PQ9NSJ1 428 aa11.99□□□□□ -0.49
VARS-219ENST00000461328 ARPC1BO15143 372 aaKnown RBP11.98□□□□□ -0.49
VARS-219ENST00000461328 TNFSF12O43508 249 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 CREBL2O60519 120 aaPredicted RBP11.98□□□□□ -0.49
VARS-219ENST00000461328 NOL3O60936 208 aaKnown RBP11.98□□□□□ -0.49
VARS-219ENST00000461328 ALDH3B2P48448 385 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 RAB9AP51151 201 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 TAS2R46P59540 309 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 KRTAP10-11P60412 298 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 EGFEM1PQ0D2K5 195 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 PJVKQ0ZLH3 352 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 IDO2Q6ZQW0 420 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 OR5M8Q8NGP6 311 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 MYOZ3Q8TDC0 251 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 UBE2E2Q96LR5 201 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 CMTM3Q96MX0 182 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 GNB4Q9HAV0 340 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 CCL28Q9NRJ3 127 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 NUBP2Q9Y5Y2 271 aa11.98□□□□□ -0.49
VARS-219ENST00000461328 SRRM4A7MD48 611 aaKnown RBP11.97□□□□□ -0.49
VARS-219ENST00000461328 SOX15O60248 233 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 ACTL6BO94805 426 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 PMP2P02689 132 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 CRYGBP07316 175 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 SAA1P0DJI8 122 aaPredicted RBP11.97□□□□□ -0.49
VARS-219ENST00000461328 EGR2P11161 476 aaPredicted RBP11.97□□□□□ -0.49
VARS-219ENST00000461328 ZNF182P17025 639 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms