RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C13orf42A0A1B0GVH6 325 aa17.5■□□□□ 0.39
PTPN4-207ENST00000460162 SHOXO15266 292 aa17.5■□□□□ 0.39
PTPN4-207ENST00000460162 MRPS14O60783 128 aaKnown RBP17.5■□□□□ 0.39
PTPN4-207ENST00000460162 ZP3P21754 424 aa17.5■□□□□ 0.39
PTPN4-207ENST00000460162 TALDO1P37837 337 aa17.5■□□□□ 0.39
PTPN4-207ENST00000460162 PJVKQ0ZLH3 352 aa17.5■□□□□ 0.39
PTPN4-207ENST00000460162 ELOVL1Q9BW60 279 aa17.5■□□□□ 0.39
PTPN4-207ENST00000460162 A0A0B4J203 849 aa17.49■□□□□ 0.39
PTPN4-207ENST00000460162 DTYMKP23919 212 aa17.49■□□□□ 0.39
PTPN4-207ENST00000460162 C22orf42Q6IC83 251 aa17.49■□□□□ 0.39
PTPN4-207ENST00000460162 H1FOOQ8IZA3 346 aaPredicted RBP17.49■□□□□ 0.39
PTPN4-207ENST00000460162 BVESQ8NE79 360 aa17.49■□□□□ 0.39
PTPN4-207ENST00000460162 DDB2Q92466 427 aa17.49■□□□□ 0.39
PTPN4-207ENST00000460162 STUB1Q9UNE7 303 aa17.49■□□□□ 0.39
PTPN4-207ENST00000460162 VMA21Q3ZAQ7 101 aa17.48■□□□□ 0.39
PTPN4-207ENST00000460162 NR2C2APQ86WQ0 139 aa17.48■□□□□ 0.39
PTPN4-207ENST00000460162 OR5T1Q8NG75 326 aa17.48■□□□□ 0.39
PTPN4-207ENST00000460162 IGLV1-51P01701 117 aa17.47■□□□□ 0.39
PTPN4-207ENST00000460162 AADACP22760 399 aa17.47■□□□□ 0.39
PTPN4-207ENST00000460162 DUTP33316 252 aaKnown RBP17.47■□□□□ 0.39
PTPN4-207ENST00000460162 UBE2UQ5VVX9 321 aa17.47■□□□□ 0.39
PTPN4-207ENST00000460162 TINAGL1Q9GZM7 467 aaPredicted RBP17.47■□□□□ 0.39
PTPN4-207ENST00000460162 ATG5Q9H1Y0 275 aa17.47■□□□□ 0.39
PTPN4-207ENST00000460162 HUWE1Q7Z6Z7 4374 aaKnown RBP17.46■□□□□ 0.39
PTPN4-207ENST00000460162 IGKV1D-8A0A087WSZ0 117 aa17.46■□□□□ 0.39
PTPN4-207ENST00000460162 SRRM4A7MD48 611 aaKnown RBP17.46■□□□□ 0.39
PTPN4-207ENST00000460162 FRMD6-AS1P0C7T7 363 aa17.46■□□□□ 0.39
PTPN4-207ENST00000460162 UBE2KP61086 200 aa17.46■□□□□ 0.39
PTPN4-207ENST00000460162 SBSPONQ8IVN8 264 aa17.46■□□□□ 0.39
PTPN4-207ENST00000460162 TEX45Q8NA69 505 aa17.46■□□□□ 0.39
PTPN4-207ENST00000460162 OSR1Q8TAX0 266 aaPredicted RBP17.46■□□□□ 0.39
PTPN4-207ENST00000460162 TRIM64CA6NLI5 447 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 LINC00473A8K010 186 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 NOTOA8MTQ0 251 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 C3orf84H3BNL1 204 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 CRYZL1O95825 349 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 FGF9P31371 208 aaPredicted RBP17.45■□□□□ 0.38
PTPN4-207ENST00000460162 MRGPRG-AS1Q2M3A8 158 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 ANKRD13BQ86YJ7 626 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 RCHY1Q96PM5 261 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 PHB2Q99623 299 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 RSRP1Q9BUV0 290 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 COA4Q9NYJ1 87 aa17.45■□□□□ 0.38
PTPN4-207ENST00000460162 CREBL2O60519 120 aaPredicted RBP17.44■□□□□ 0.38
PTPN4-207ENST00000460162 SCGNO76038 276 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 CTXN2P0C2S0 81 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 PRSS8Q16651 343 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 HACD4Q5VWC8 232 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 OVCH2Q7RTZ1 564 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 ZNF645Q8N7E2 425 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 FCGR1BQ92637 280 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 USMG5Q96IX5 58 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 DCSTAMPQ9H295 470 aa17.44■□□□□ 0.38
PTPN4-207ENST00000460162 TXNL4BQ9NX01 149 aaKnown RBP17.44■□□□□ 0.38
PTPN4-207ENST00000460162 ELF5Q9UKW6 265 aaPredicted RBP17.44■□□□□ 0.38
PTPN4-207ENST00000460162 TNCP24821 2201 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 SMIM30A4D0T7 59 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 ANKRD34BA5PLL1 514 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 PSMB9P28065 219 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 DYRK1AQ13627 763 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 KLF5Q13887 457 aaPredicted RBP17.43■□□□□ 0.38
PTPN4-207ENST00000460162 TNXAQ16473 311 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 ZNF343Q6P1L6 599 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 HAPLN4Q86UW8 402 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 OR9G4Q8NGQ1 327 aa17.43■□□□□ 0.38
PTPN4-207ENST00000460162 SRSF12Q8WXF0 261 aaKnown RBP17.43■□□□□ 0.38
PTPN4-207ENST00000460162 OR9G9P0C7N8 305 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 CD36P16671 472 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 CDNFQ49AH0 187 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 IDO2Q6ZQW0 420 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 KCTD9Q7L273 389 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 TPRA1Q86W33 373 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 SPARTQ8N0X7 666 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 ADAD2Q8NCV1 583 aaKnown RBP17.42■□□□□ 0.38
PTPN4-207ENST00000460162 ACOT12Q8WYK0 555 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 PEF1Q9UBV8 284 aaKnown RBP17.42■□□□□ 0.38
PTPN4-207ENST00000460162 OR2W1Q9Y3N9 320 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 DNAH7Q8WXX0 4024 aa17.42■□□□□ 0.38
PTPN4-207ENST00000460162 MSGN1A6NI15 193 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 MPPED1O15442 326 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 SLC22A5O76082 557 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 SAA1P0DJI8 122 aaPredicted RBP17.41■□□□□ 0.38
PTPN4-207ENST00000460162 DEFA5Q01523 94 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 CDK10Q15131 360 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 ZMAT4Q9H898 229 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 MRPS7Q9Y2R9 242 aaKnown RBP17.41■□□□□ 0.38
PTPN4-207ENST00000460162 PRELID3BQ9Y3B1 194 aa17.41■□□□□ 0.38
PTPN4-207ENST00000460162 TMEM235A6NFC5 223 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 HLA-DQB1P01920 261 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 APELAP0DMC3 54 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 SGPP2Q8IWX5 399 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 NUDCD2Q8WVJ2 157 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 ST6GALNAC5Q9BVH7 336 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 DAPK2Q9UIK4 370 aa17.4■□□□□ 0.38
PTPN4-207ENST00000460162 RBMX2Q9Y388 322 aaKnown RBP17.4■□□□□ 0.38
PTPN4-207ENST00000460162 FAM223BA6NKX1 122 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 A8MZ25 164 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 ACTL6BO94805 426 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 IGHV4-30-4P0DP06 118 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 NFYAP23511 347 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms