RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CNIH1O95406 144 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 HLA-DQB1P01920 261 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 CD36P16671 472 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 ZP3P21754 424 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 UBE2KP61086 200 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 GNB1P62873 340 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 VMA21Q3ZAQ7 101 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 TIMM50Q3ZCQ8 353 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 ZNF260Q3ZCT1 412 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 OVCH2Q7RTZ1 564 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 ZNF645Q8N7E2 425 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 DRAXINQ8NBI3 349 aaPredicted RBP7.74□□□□□ -1.17
HDLBP-228ENST00000459788 LFNGQ8NES3 379 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 USMG5Q96IX5 58 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 RANGRFQ9HD47 186 aaPredicted RBP7.74□□□□□ -1.17
HDLBP-228ENST00000459788 PRELID3BQ9Y3B1 194 aa7.74□□□□□ -1.17
HDLBP-228ENST00000459788 A0A075B6Q4 140 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 TRGV3P03979 118 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 TPPP2P59282 170 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 GNG2P59768 71 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 ACSM6Q6P461 480 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 BVESQ8NE79 360 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 OR6Q1Q8NGQ2 317 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 DCUN1D4Q92564 292 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 HSD17B10Q99714 261 aaKnown RBP7.73□□□□□ -1.17
HDLBP-228ENST00000459788 AIFM2Q9BRQ8 373 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 ELOVL1Q9BW60 279 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 RHBDL2Q9NX52 303 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 ZNF230Q9UIE0 474 aaPredicted RBP7.73□□□□□ -1.17
HDLBP-228ENST00000459788 DAPK2Q9UIK4 370 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 ANXA10Q9UJ72 324 aa7.73□□□□□ -1.17
HDLBP-228ENST00000459788 MRPS7Q9Y2R9 242 aaKnown RBP7.73□□□□□ -1.17
HDLBP-228ENST00000459788 RRP15Q9Y3B9 282 aaKnown RBP7.73□□□□□ -1.17
HDLBP-228ENST00000459788 C13orf42A0A1B0GVH6 325 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 TUSC2O75896 110 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 SDC2P34741 201 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 MAS1LP35410 378 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 ECI1P42126 302 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 KIR2DS2P43631 304 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 CBX5P45973 191 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 SSBP2P81877 361 aaPredicted RBP7.72□□□□□ -1.17
HDLBP-228ENST00000459788 CDK10Q15131 360 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 PRSS8Q16651 343 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 ZNF66Q6ZN08 573 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 SLC25A42Q86VD7 318 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 MMD2Q8IY49 270 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 ZBTB34Q8NCN2 500 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 VSTM2AQ8TAG5 236 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 DLX4Q92988 240 aaPredicted RBP7.72□□□□□ -1.17
HDLBP-228ENST00000459788 BORCS5Q969J3 196 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 RBMXL1Q96E39 390 aaKnown RBP7.72□□□□□ -1.17
HDLBP-228ENST00000459788 C5orf30Q96GV9 206 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 WWC2-AS2Q96NR7 200 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 CLCC1Q96S66 551 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 SPIN2AQ99865 258 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 SPIN2BQ9BPZ2 258 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 TINAGL1Q9GZM7 467 aaPredicted RBP7.72□□□□□ -1.17
HDLBP-228ENST00000459788 RBMX2Q9Y388 322 aaKnown RBP7.72□□□□□ -1.17
HDLBP-228ENST00000459788 A3GALT2U3KPV4 340 aa7.72□□□□□ -1.17
HDLBP-228ENST00000459788 IGHV4OR15-8A0A075B7B6 117 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 IGKV1D-8A0A087WSZ0 117 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 A0A087WW49 117 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 A0A0B4J203 849 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 FAM223BA6NKX1 122 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 SRRM4A7MD48 611 aaKnown RBP7.71□□□□□ -1.18
HDLBP-228ENST00000459788 LINC00473A8K010 186 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 CRYZL1O95825 349 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 FGF2P09038 288 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 OR9G9P0C7N8 305 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 LINC00205P59089 165 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 MRGPRG-AS1Q2M3A8 158 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 ZNF343Q6P1L6 599 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 FAM223AQ8IWN6 122 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 OR4S2Q8NH73 311 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 GRPEL2Q8TAA5 225 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 LGALS14Q8TCE9 139 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 MAFIPQ8WZ33 124 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 OR4C12Q96R67 309 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 FAM103A1Q9BTL3 118 aaKnown RBP7.71□□□□□ -1.18
HDLBP-228ENST00000459788 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 OR51E2Q9H255 320 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 VCX3AQ9NNX9 186 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 DIABLOQ9NR28 239 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 SPATA2Q9UM82 520 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 SMAD5-AS1Q9Y6J3 95 aa7.71□□□□□ -1.18
HDLBP-228ENST00000459788 TMEM235A6NFC5 223 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 RBFOX2O43251 390 aaKnown RBP eCLIP7.7□□□□□ -1.18
HDLBP-228ENST00000459788 SSX5O60225 188 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 SAP30O75446 220 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 ACTL6BO94805 426 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 SNRPBP14678 240 aaKnown RBP7.7□□□□□ -1.18
HDLBP-228ENST00000459788 ARPC4P59998 168 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 EIF4EBP1Q13541 118 aaPredicted RBP7.7□□□□□ -1.18
HDLBP-228ENST00000459788 KLF5Q13887 457 aaPredicted RBP7.7□□□□□ -1.18
HDLBP-228ENST00000459788 TATDN3Q17R31 274 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 KLK9Q2XQG4 91 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 KCTD9Q7L273 389 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 HOGA1Q86XE5 327 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 ADAD2Q8NCV1 583 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms