RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 HNF4GQ14541 408 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 RTL8BQ17RB0 113 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 TMEM177Q53S58 311 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 LIAT1Q6ZQX7 453 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 SPAG16Q8N0X2 631 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 RBM14Q96PK6 669 aaKnown RBP13.45□□□□□ -0.26
TRIM39-211ENST00000458516 SLC25A33Q9BSK2 321 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 LIN7CQ9NUP9 197 aaKnown RBP13.45□□□□□ -0.26
TRIM39-211ENST00000458516 FLVCR2Q9UPI3 526 aa13.45□□□□□ -0.26
TRIM39-211ENST00000458516 FAM240BA0A1B0GVZ2 78 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 CRYM-AS1A6NIL9 109 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 RBFOX2O43251 390 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRIM39-211ENST00000458516 GPR137BO60478 399 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 RAMP3O60896 148 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 IFNA2P01563 188 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
TRIM39-211ENST00000458516 VSIG10L2P0DP72 767 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 CNTFRP26992 372 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
TRIM39-211ENST00000458516 DHRS7BQ6IAN0 325 aaPredicted RBP13.44□□□□□ -0.26
TRIM39-211ENST00000458516 TMED4Q7Z7H5 227 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 OR4C13Q8NGP0 309 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 OR4S2Q8NH73 311 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
TRIM39-211ENST00000458516 C20orf85Q9H1P6 137 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 NAA60Q9H7X0 242 aa13.44□□□□□ -0.26
TRIM39-211ENST00000458516 H0Y980 276 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 ARPC1BO15143 372 aaKnown RBP13.43□□□□□ -0.26
TRIM39-211ENST00000458516 F2RL1P55085 397 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 SRSF2Q01130 221 aaKnown RBP13.43□□□□□ -0.26
TRIM39-211ENST00000458516 CBX3Q13185 183 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 ZNF585BQ52M93 769 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 NRARPQ7Z6K4 114 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 CENPSQ8N2Z9 138 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 TCTEX1D1Q8N7M0 179 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 ENKURQ8TC29 256 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 HARBI1Q96MB7 349 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 TP53RKQ96S44 253 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 RNF5Q99942 180 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 PLSCR3Q9NRY6 295 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 MOB4Q9Y3A3 225 aa13.43□□□□□ -0.26
TRIM39-211ENST00000458516 C3orf85A0A1B0GTC6 90 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 PEX14O75381 377 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 NDUFA3O95167 84 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 AKR1C4P17516 323 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 RPS16P62249 146 aaKnown RBP13.42□□□□□ -0.26
TRIM39-211ENST00000458516 DHODHQ02127 395 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 MMDQ15546 238 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 SLC25A42Q86VD7 318 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 PRIMA1Q86XR5 153 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 NPBQ8NG41 125 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 OSR1Q8TAX0 266 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-211ENST00000458516 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 FAM212BQ9NTI7 297 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-211ENST00000458516 NUDT15Q9NV35 164 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 PLXNB1O43157 2135 aa13.42□□□□□ -0.26
TRIM39-211ENST00000458516 TEX13DA0A0J9YY54 714 aaPredicted RBP13.41□□□□□ -0.26
TRIM39-211ENST00000458516 SRRM4A7MD48 611 aaKnown RBP13.41□□□□□ -0.26
TRIM39-211ENST00000458516 SHOXO15266 292 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 NBR2O15453 112 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 S1PR2O95136 353 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 OR5AC1P0C628 307 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 TAS2R31P59538 309 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 SUPT4H1P63272 117 aaKnown RBP13.41□□□□□ -0.26
TRIM39-211ENST00000458516 Q8N9W7 124 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 DUSP18Q8NEJ0 188 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 OR8H1Q8NGG4 311 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 GALNT14Q96FL9 552 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 RAB18Q9NP72 206 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 NUBP2Q9Y5Y2 271 aa13.41□□□□□ -0.26
TRIM39-211ENST00000458516 TNCP24821 2201 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 TRAV6A0A075B6T7 132 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 FAM181BA6NEQ2 426 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 TRIM77I1YAP6 450 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 FGF16O43320 207 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 B3GALNT1O75752 331 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 SPDEFO95238 335 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 HPRT1P00492 218 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 AMY1AP04745 511 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 ANXA7P20073 488 aaKnown RBP13.4□□□□□ -0.26
TRIM39-211ENST00000458516 UCP1P25874 307 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 LPAR6P43657 344 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 LGALS7P47929 136 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 PSG5Q15238 335 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 SP6Q3SY56 376 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 TMEM128Q5BJH2 165 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 SGPP2Q8IWX5 399 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 FAM71E2Q8N5Q1 922 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 C5orf56Q8N8D9 126 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 TSNAXQ99598 290 aaKnown RBP13.4□□□□□ -0.26
TRIM39-211ENST00000458516 PLEKHA2Q9HB19 425 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 C1RLQ9NZP8 487 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 COMMD9Q9P000 198 aa13.4□□□□□ -0.26
TRIM39-211ENST00000458516 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
TRIM39-211ENST00000458516 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
TRIM39-211ENST00000458516 NCBP2LA6PVI3 153 aaKnown RBP13.39□□□□□ -0.27
TRIM39-211ENST00000458516 RRHO14718 337 aa13.39□□□□□ -0.27
TRIM39-211ENST00000458516 PTTG1O95997 202 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms