RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SOX15O60248 233 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 TUSC2O75896 110 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 IGLV2-23P01705 113 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 KRTAP10-11P60412 298 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 VMA21Q3ZAQ7 101 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
CPSF6-203ENST00000456847 LINC00473A8K010 186 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 SLC22A5O76082 557 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 HLA-DQB1P01920 261 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 FCER2P06734 321 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 RPS19P39019 145 aaKnown RBP12.61□□□□□ -0.39
CPSF6-203ENST00000456847 TPPP2P59282 170 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 ZNF616Q08AN1 781 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 EGFEM1PQ0D2K5 195 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 KIAA0141Q14154 515 aaPredicted RBP12.61□□□□□ -0.39
CPSF6-203ENST00000456847 AKIRIN2Q53H80 203 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 UBE2NLQ5JXB2 153 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 GVQW1Q8N7I0 195 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 DDB2Q92466 427 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 MS4A10Q96PG2 267 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 DCUN1D5Q9BTE7 237 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 AUNIPQ9H7T9 357 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 ZNF355PQ9NSJ1 428 aa12.61□□□□□ -0.39
CPSF6-203ENST00000456847 I3L521 148 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 ARPC1BO15143 372 aaKnown RBP12.6□□□□□ -0.39
CPSF6-203ENST00000456847 FHL3Q13643 280 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 OR2B11Q5JQS5 317 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 S100A16Q96FQ6 103 aaKnown RBP12.6□□□□□ -0.39
CPSF6-203ENST00000456847 IFT46Q9NQC8 304 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 MRPS7Q9Y2R9 242 aaKnown RBP12.6□□□□□ -0.39
CPSF6-203ENST00000456847 RBMX2Q9Y388 322 aaKnown RBP12.6□□□□□ -0.39
CPSF6-203ENST00000456847 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 SEC14L6B5MCN3 397 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 FCGR3BO75015 233 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 PTHLHP12272 177 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 RUNX1Q01196 453 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 HOGA1Q86XE5 327 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 SAMD12Q8N8I0 201 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 PHB2Q99623 299 aa12.6□□□□□ -0.39
CPSF6-203ENST00000456847 ALX4Q9H161 411 aaPredicted RBP12.6□□□□□ -0.39
CPSF6-203ENST00000456847 ZMAT5Q9UDW3 170 aaKnown RBP12.6□□□□□ -0.39
CPSF6-203ENST00000456847 WI2-2373I1.2A0A1W2PRP0 233 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 MEIS3P1A6NDR6 274 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 K7EIL1 84 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 TRGV3P03979 118 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 CRYGBP07316 175 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 CBX5P45973 191 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 OSR1Q8TAX0 266 aaPredicted RBP12.59□□□□□ -0.39
CPSF6-203ENST00000456847 TCTEX1D2Q8WW35 142 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 FUNDC2Q9BWH2 189 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 SLA2Q9H6Q3 261 aa12.59□□□□□ -0.39
CPSF6-203ENST00000456847 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.39
CPSF6-203ENST00000456847 XRCC3O43542 346 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 IGHV3-11P01762 117 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.39
CPSF6-203ENST00000456847 FCGR2CP31995 323 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 UBE2KP61086 200 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 NCS1P62166 190 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 TNXAQ16473 311 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 DEFB121Q5J5C9 76 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 TMEM69Q5SWH9 247 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 SECTM1Q8WVN6 248 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 ACOT12Q8WYK0 555 aa12.58□□□□□ -0.39
CPSF6-203ENST00000456847 TRIM64CA6NLI5 447 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 AADACP22760 399 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 DGCR2P98153 550 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 IDO2Q6ZQW0 420 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 TEX45Q8NA69 505 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 POC5Q8NA72 575 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 OR5T1Q8NG75 326 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 OR13F1Q8NGS4 319 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 HSD17B10Q99714 261 aaKnown RBP12.58□□□□□ -0.4
CPSF6-203ENST00000456847 TAS2R8Q9NYW2 309 aa12.58□□□□□ -0.4
CPSF6-203ENST00000456847 LINC01619G3V211 115 aa12.57□□□□□ -0.4
CPSF6-203ENST00000456847 CREBL2O60519 120 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-203ENST00000456847 VBP1P61758 197 aa12.57□□□□□ -0.4
CPSF6-203ENST00000456847 RPL30P62888 115 aaKnown RBP12.57□□□□□ -0.4
CPSF6-203ENST00000456847 SSBP2P81877 361 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-203ENST00000456847 ASPHD1Q5U4P2 390 aa12.57□□□□□ -0.4
CPSF6-203ENST00000456847 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
CPSF6-203ENST00000456847 SLC25A46Q96AG3 418 aa12.57□□□□□ -0.4
CPSF6-203ENST00000456847 MPPED1O15442 326 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 ACTL6BO94805 426 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 SAA1P0DJI8 122 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-203ENST00000456847 TAS2R20P59543 309 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 FXYD4P59646 89 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 PRSS8Q16651 343 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
CPSF6-203ENST00000456847 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 TGP01266 2768 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 IGHV4OR15-8A0A075B7B6 117 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 A0A087WW49 117 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 C13orf42A0A1B0GVH6 325 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms