RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SIGLECL1Q8N7X8 197 aa6.47□□□□□ -1.37
HDAC9-218ENST00000456174 EAF1Q96JC9 268 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-218ENST00000456174 POM121L2Q96KW2 1035 aa6.47□□□□□ -1.37
HDAC9-218ENST00000456174 SAMD10Q9BYL1 202 aa6.47□□□□□ -1.37
HDAC9-218ENST00000456174 MOB1AQ9H8S9 216 aa6.47□□□□□ -1.37
HDAC9-218ENST00000456174 PLEKHF2Q9H8W4 249 aa6.47□□□□□ -1.37
HDAC9-218ENST00000456174 CNOT1A5YKK6 2376 aaKnown RBP6.46□□□□□ -1.37
HDAC9-218ENST00000456174 DMXL1Q9Y485 3027 aa6.46□□□□□ -1.37
HDAC9-218ENST00000456174 FAM24AA6NFZ4 105 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF716A6NP11 495 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 SIRPB1O00241 398 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 C1QTNF9P0C862 333 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 HIST1H1DP16402 221 aaKnown RBP6.46□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF93P35789 620 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF133P52736 654 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-218ENST00000456174 GNMTQ14749 295 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 RNFT1Q5M7Z0 435 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 RTN4RL2Q86UN3 420 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 LGI3Q8N145 548 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 SPSB1Q96BD6 273 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 ABHD14BQ96IU4 210 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 SIGMAR1Q99720 223 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 RBM24Q9BX46 236 aaKnown RBP6.46□□□□□ -1.38
HDAC9-218ENST00000456174 DLL3Q9NYJ7 618 aa6.46□□□□□ -1.38
HDAC9-218ENST00000456174 A0A0A6YYD4 124 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 GRIFINA4D1Z8 144 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF878C9JN71 531 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 P2RY10O00398 339 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 SH2D1BO14796 132 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 DHHO43323 396 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 CD5LO43866 347 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 GYPAP02724 150 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 CRISP2P16562 243 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 WT1P19544 449 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ASCL1P50553 236 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 CCL11P51671 97 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 CKS1BP61024 79 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 SRYQ05066 204 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 PMCHL1Q16048 86 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 SPIN3Q5JUX0 258 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 FAM78BQ5VT40 261 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 SHISA2Q6UWI4 295 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ST6GALNAC3Q8NDV1 305 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 SFRP2Q96HF1 295 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 TM2D1Q9BX74 207 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ULBP2Q9BZM5 246 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 NRN1Q9NPD7 142 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 FAM206AQ9NX38 181 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 PEF1Q9UBV8 284 aaKnown RBP6.45□□□□□ -1.38
HDAC9-218ENST00000456174 HHLA2Q9UM44 414 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 MUC6Q6W4X9 2439 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 LOC107986453A0A1B0GWG9 222 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 RER1O15258 196 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 MLNRO43193 412 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 RAD51DO75771 328 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ISG15P05161 165 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 NTF4P34130 210 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF766Q5HY98 468 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 PLAC9Q5JTB6 97 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 BVES-AS1Q5T3Y7 98 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ASCL4Q6XD76 172 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 FOXL2NBQ6ZUU3 175 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ASCL5Q7RTU5 278 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 AAED1Q7RTV5 226 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ERASQ7Z444 233 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-218ENST00000456174 OR52M1Q8NGK5 317 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ZDHHC11Q9H8X9 412 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 TBL2Q9Y4P3 447 aaKnown RBP6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ZFHX2Q9C0A1 2572 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF407Q9C0G0 2248 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 DNAJC13O75165 2243 aa6.45□□□□□ -1.38
HDAC9-218ENST00000456174 ARID1AO14497 2285 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 RIF1Q5UIP0 2472 aaKnown RBP6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TRAV9-1A0A075B6T8 112 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TRAV9-2A0A087WT02 112 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TRAV8-6A0A0B4J262 113 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 DPRXA6NFQ7 191 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 C17orf112F2Z3M2 114 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TSPAN13O95857 204 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TIMP3P35625 211 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 RUNX1Q01196 453 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF154Q13106 437 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF726P1Q15940 193 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 LIAT1Q6ZQX7 453 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 ODF3L1Q8IXM7 274 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 SLC22A24Q8N4F4 322 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TMEM252Q8N6L7 170 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 FAM169BQ8N8A8 192 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 TMEM178AQ8NBL3 297 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 PLPPR1Q8TBJ4 325 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 SLC25A40Q8TBP6 338 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 NABP1Q96AH0 204 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 ZNF837Q96EG3 531 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-218ENST00000456174 ATP5SQ99766 215 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 PBOV1Q9GZY1 135 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
HDAC9-218ENST00000456174 PNRC2Q9NPJ4 139 aaKnown RBP6.44□□□□□ -1.38
HDAC9-218ENST00000456174 CELSR3Q9NYQ7 3312 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms