RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MECP2P51608 486 aaKnown RBP12.21□□□□□ -0.45
GPC1-206ENST00000455111 ZNF45Q02386 682 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 TRAM1Q15629 374 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 ZNF343Q6P1L6 599 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 OR10R2Q8NGX6 335 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 HARBI1Q96MB7 349 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 OR4C12Q96R67 309 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 TINAGL1Q9GZM7 467 aaPredicted RBP12.21□□□□□ -0.45
GPC1-206ENST00000455111 RANGRFQ9HD47 186 aaPredicted RBP12.21□□□□□ -0.45
GPC1-206ENST00000455111 RAB22AQ9UL26 194 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 PSMA1P25786 263 aaKnown RBP12.2□□□□□ -0.46
GPC1-206ENST00000455111 DUTP33316 252 aaKnown RBP12.2□□□□□ -0.46
GPC1-206ENST00000455111 SYNJ2BPP57105 145 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 IDO2Q6ZQW0 420 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
GPC1-206ENST00000455111 ADAD2Q8NCV1 583 aaKnown RBP12.2□□□□□ -0.46
GPC1-206ENST00000455111 RAB3CQ96E17 227 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 CCDC90BQ9GZT6 254 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 STUB1Q9UNE7 303 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 DMRT1Q9Y5R6 373 aa12.2□□□□□ -0.46
GPC1-206ENST00000455111 A0A075B6Q4 140 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 SMIM30A4D0T7 59 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 IFITM5A6NNB3 132 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 PRH1P02810 166 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
GPC1-206ENST00000455111 LGALS7P47929 136 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 SERPINB10P48595 397 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 TBCEQ15813 527 aaPredicted RBP12.19□□□□□ -0.46
GPC1-206ENST00000455111 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 C19orf35Q6ZS72 473 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 OR9G4Q8NGQ1 327 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 RSRP1Q9BUV0 290 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 VCXQ9H320 206 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 ACOT13Q9NPJ3 140 aa12.19□□□□□ -0.46
GPC1-206ENST00000455111 TRAV1-2A0A0B4J238 106 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 A0A1B0GW64 132 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 RPL30P62888 115 aaKnown RBP12.18□□□□□ -0.46
GPC1-206ENST00000455111 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
GPC1-206ENST00000455111 PRSS8Q16651 343 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 ZFAND6Q6FIF0 208 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 Q6ZS49 121 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 OR10J5Q8NHC4 309 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 NDUFB11Q9NX14 153 aa12.18□□□□□ -0.46
GPC1-206ENST00000455111 IGKV1D-13A0A0B4J2D9 117 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 C13orf42A0A1B0GVH6 325 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 E7EUB6 86 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 BMPR1BO00238 502 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 SHOXO15266 292 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 CNIH1O95406 144 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 DIRAS3O95661 229 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 IGKV1-13P0DP09 117 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 ZP3P21754 424 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 UBE2KP61086 200 aa12.17□□□□□ -0.46
GPC1-206ENST00000455111 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
GPC1-206ENST00000455111 SRSF12Q8WXF0 261 aaKnown RBP12.17□□□□□ -0.46
GPC1-206ENST00000455111 PEF1Q9UBV8 284 aaKnown RBP12.17□□□□□ -0.46
GPC1-206ENST00000455111 TRBV9A0A0B4J1U6 114 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 TRDV1A0A1B0GX56 115 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 J3QRK9 145 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 CRYZL1O95825 349 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 RAB6AP20340 208 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
GPC1-206ENST00000455111 HAGHQ16775 308 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 ZNF367Q7RTV3 350 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 ANKRD13BQ86YJ7 626 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 TEX45Q8NA69 505 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 ZNF430Q9H8G1 570 aaPredicted RBP12.16□□□□□ -0.46
GPC1-206ENST00000455111 RETNQ9HD89 108 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 AKIP1Q9NQ31 210 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
GPC1-206ENST00000455111 A0A0G2JLM5 398 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 LCE6AA0A183 80 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 SSX5O60225 188 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 SAA1P0DJI8 122 aaPredicted RBP12.15□□□□□ -0.46
GPC1-206ENST00000455111 LYL1P12980 280 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 TNXAQ16473 311 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 C22orf42Q6IC83 251 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 ZMAT4Q9H898 229 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
GPC1-206ENST00000455111 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 RAB3BP20337 219 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 NFYAP23511 347 aaPredicted RBP12.14□□□□□ -0.47
GPC1-206ENST00000455111 CD40LGP29965 261 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 IZUMO2Q6UXV1 221 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 CNBD2Q96M20 576 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 GPHA2Q96T91 129 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
GPC1-206ENST00000455111 HMX3A6NHT5 357 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 ZNF785A8K8V0 405 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 MYOD1P15172 320 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms