RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SURF2Q15527 256 aaPredicted RBP6.96□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF79Q15937 498 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 RNASE12Q5GAN4 147 aaKnown RBP6.96□□□□□ -1.3
COL28A1-205ENST00000453441 TRIQKQ629K1 86 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SLC38A6Q8IZM9 456 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 TOMM5Q8N4H5 51 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 Q8N6K4 173 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 TCTEX1D1Q8N7M0 179 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 BVESQ8NE79 360 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 CD300LFQ8TDQ1 290 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SECTM1Q8WVN6 248 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SCGB3A2Q96PL1 93 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 TSNAXQ99598 290 aaKnown RBP6.96□□□□□ -1.3
COL28A1-205ENST00000453441 AIFM2Q9BRQ8 373 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 PRSS22Q9GZN4 317 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SRRQ9GZT4 340 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SLC5A7Q9GZV3 580 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 C16orf95Q9H693 158 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 BEX1Q9HBH7 125 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 TNFRSF19Q9NS68 423 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 FAM212BQ9NTI7 297 aaPredicted RBP6.96□□□□□ -1.3
COL28A1-205ENST00000453441 LIN7CQ9NUP9 197 aaKnown RBP6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SCP2D1Q9UJQ7 156 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 NAP1L6A6NFF2 107 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 H7C2Y5 167 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 GPR31O00270 319 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 RBFOX2O43251 390 aaKnown RBP eCLIP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 KCNAB3O43448 404 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 CHST1O43916 411 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 PROP1O75360 226 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 AMY2AP04746 511 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 PAX6P26367 422 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 CD40LGP29965 261 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 LGALS7P47929 136 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 RAG2P55895 527 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 FXYD4P59646 89 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 KRTAP24-1Q3LI83 254 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 KCTD9Q7L273 389 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 LHFPL1Q86WI0 220 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 Q8N2B8 174 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF383Q8NA42 475 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 POC5Q8NA72 575 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 NPBQ8NG41 125 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 OR4S2Q8NH73 311 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 OR2T6Q8NHC8 308 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 TERB2Q8NHR7 220 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 OSR1Q8TAX0 266 aaPredicted RBP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 ZFAND1Q8TCF1 268 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 DDB2Q92466 427 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 TRIM63Q969Q1 353 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 FLYWCH2Q96CP2 140 aaKnown RBP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 C7orf50Q9BRJ6 194 aaKnown RBP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 CCDC32Q9BV29 185 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 C19orf24Q9BVV8 132 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 WDR12Q9GZL7 423 aaKnown RBP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 TINAGL1Q9GZM7 467 aaPredicted RBP6.95□□□□□ -1.3
COL28A1-205ENST00000453441 SLC35D1Q9NTN3 355 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 KIAA1456Q9P272 454 aa6.95□□□□□ -1.3
COL28A1-205ENST00000453441 CUBNO60494 3623 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 CENPXA8MT69 81 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 M0QYG6 137 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 NBR2O15453 112 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 CREBL2O60519 120 aaPredicted RBP6.94□□□□□ -1.3
COL28A1-205ENST00000453441 B3GALNT1O75752 331 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 NDUFA3O95167 84 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 IGLV2-14P01704 120 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 GNRHRP30968 328 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 RND3P61587 244 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 EIF4EBP1Q13541 118 aaPredicted RBP6.94□□□□□ -1.3
COL28A1-205ENST00000453441 KLF9Q13886 244 aaPredicted RBP6.94□□□□□ -1.3
COL28A1-205ENST00000453441 MMDQ15546 238 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 TMEM177Q53S58 311 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 AADACL3Q5VUY0 350 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 CCBE1Q6UXH8 406 aaPredicted RBP6.94□□□□□ -1.3
COL28A1-205ENST00000453441 TMEM219Q86XT9 240 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 C5orf56Q8N8D9 126 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 CCDC71LQ8N9Z2 235 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 OR4C16Q8NGL9 310 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 RASL11BQ9BPW5 248 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 FXYD6Q9H0Q3 95 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 AKIP1Q9NQ31 210 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 CCL28Q9NRJ3 127 aa6.94□□□□□ -1.3
COL28A1-205ENST00000453441 PIGBOS1A0A0B4J2F0 54 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 CLPSL1A2RUU4 121 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 NCBP2LA6PVI3 153 aaKnown RBP6.93□□□□□ -1.3
COL28A1-205ENST00000453441 J3QRK9 145 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 HRASP01112 189 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 CTSDP07339 412 aaPredicted RBP6.93□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF735P0CB33 412 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 PGAM2P15259 253 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 CD24P25063 80 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 PPP5CP53041 499 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 HNF4GQ14541 408 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 ZNF846Q147U1 533 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 VMA21Q3ZAQ7 101 aa6.93□□□□□ -1.3
COL28A1-205ENST00000453441 ABCA11PQ4W5N1 156 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms