RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 STUB1Q9UNE7 303 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
CHD3-206ENST00000452447 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 A0A087WW49 117 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 NHLRC4P0CG21 123 aaPredicted RBP9.97□□□□□ -0.81
CHD3-206ENST00000452447 RRASP10301 218 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 DTYMKP23919 212 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 CDNFQ49AH0 187 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 Q6ZS49 121 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 TPRA1Q86W33 373 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 BVESQ8NE79 360 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 DAPK2Q9UIK4 370 aa9.97□□□□□ -0.81
CHD3-206ENST00000452447 ARPC1BO15143 372 aaKnown RBP9.96□□□□□ -0.82
CHD3-206ENST00000452447 SCGNO76038 276 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 IGLV2-23P01705 113 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 HSPB1P04792 205 aaKnown RBP9.96□□□□□ -0.82
CHD3-206ENST00000452447 SMIM18P0DKX4 95 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 PITPNAQ00169 270 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 PJVKQ0ZLH3 352 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 HACD4Q5VWC8 232 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 H1FOOQ8IZA3 346 aaPredicted RBP9.96□□□□□ -0.82
CHD3-206ENST00000452447 POC5Q8NA72 575 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 OR5T1Q8NG75 326 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 ADTRPQ96IZ2 230 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 TMEM68Q96MH6 324 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 ST6GALNAC5Q9BVH7 336 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.96□□□□□ -0.82
CHD3-206ENST00000452447 NDUFA13Q9P0J0 144 aa9.96□□□□□ -0.82
CHD3-206ENST00000452447 ELF5Q9UKW6 265 aaPredicted RBP9.96□□□□□ -0.82
CHD3-206ENST00000452447 IGKV1D-8A0A087WSZ0 117 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 A0A0G2JLM5 398 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 H3BUA1 57 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 CTXN2P0C2S0 81 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 TMEM177Q53S58 311 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 RHOVQ96L33 236 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 DCSTAMPQ9H295 470 aa9.95□□□□□ -0.82
CHD3-206ENST00000452447 KMT2CQ8NEZ4 4911 aaKnown RBP9.94□□□□□ -0.82
CHD3-206ENST00000452447 C13orf42A0A1B0GVH6 325 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 J3QRK9 145 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 CRYGBP07316 175 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 DUTP33316 252 aaKnown RBP9.94□□□□□ -0.82
CHD3-206ENST00000452447 VMA21Q3ZAQ7 101 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 SFXN4Q6P4A7 337 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 WWC2-AS2Q96NR7 200 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 OR4C12Q96R67 309 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 RANGRFQ9HD47 186 aaPredicted RBP9.94□□□□□ -0.82
CHD3-206ENST00000452447 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 HUWE1Q7Z6Z7 4374 aaKnown RBP9.94□□□□□ -0.82
CHD3-206ENST00000452447 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 STAB2Q8WWQ8 2551 aa9.94□□□□□ -0.82
CHD3-206ENST00000452447 TMEM235A6NFC5 223 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 SRRM4A7MD48 611 aaKnown RBP9.93□□□□□ -0.82
CHD3-206ENST00000452447 CRYZL1O95825 349 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 SDC2P34741 201 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 GNG2P59768 71 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 MXD1Q05195 221 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 ACSM6Q6P461 480 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 ZNF645Q8N7E2 425 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 LGALS14Q8TCE9 139 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 NUDCD2Q8WVJ2 157 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 PHB2Q99623 299 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 OR51E2Q9H255 320 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 OR2W1Q9Y3N9 320 aa9.93□□□□□ -0.82
CHD3-206ENST00000452447 LOC100506127A0A0U1RQW1 187 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 LINC00473A8K010 186 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 SLC22A5O76082 557 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 CD36P16671 472 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ZP3P21754 424 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 NFYAP23511 347 aaPredicted RBP9.92□□□□□ -0.82
CHD3-206ENST00000452447 UBE2KP61086 200 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 SSBP2P81877 361 aaPredicted RBP9.92□□□□□ -0.82
CHD3-206ENST00000452447 TNXAQ16473 311 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 TEX45Q8NA69 505 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
CHD3-206ENST00000452447 DDB2Q92466 427 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ASCL2Q99929 193 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 BCL7BQ9BQE9 202 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ELOVL1Q9BW60 279 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 RHBDL2Q9NX52 303 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 COA4Q9NYJ1 87 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 PRELID3BQ9Y3B1 194 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ANKRD34BA5PLL1 514 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 A6NHS1 94 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 MSGN1A6NI15 193 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 MPPED1O15442 326 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 CREBL2O60519 120 aaPredicted RBP9.92□□□□□ -0.82
CHD3-206ENST00000452447 TUSC2O75896 110 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ACTL6BO94805 426 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 APELAP0DMC3 54 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 SPNP16150 400 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ALDH3B2P48448 385 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 CNIH2Q6PI25 160 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 IDO2Q6ZQW0 420 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 KCTD9Q7L273 389 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 OR13F1Q8NGS4 319 aa9.92□□□□□ -0.82
CHD3-206ENST00000452447 ACOT12Q8WYK0 555 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms