RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 SHOXO15266 292 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 SPDEFO95238 335 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 CNIH1O95406 144 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 TRGV3P03979 118 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 OR8U8P0C7N1 319 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 APELAP0DMC3 54 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 EGR2P11161 476 aaPredicted RBP6.72□□□□□ -1.33
RFX3-209ENST00000451859 DEFA5Q01523 94 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 TMEM267Q0VDI3 215 aaPredicted RBP6.72□□□□□ -1.33
RFX3-209ENST00000451859 PJVKQ0ZLH3 352 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 FXYD3Q14802 87 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 C19orf54Q5BKX5 351 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 PDPNQ86YL7 162 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.72□□□□□ -1.33
RFX3-209ENST00000451859 OR5T1Q8NG75 326 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 NUDCD2Q8WVJ2 157 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 DCUN1D4Q92564 292 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 FLYWCH2Q96CP2 140 aaKnown RBP6.72□□□□□ -1.33
RFX3-209ENST00000451859 CABLES2Q9BTV7 478 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 ST6GALNAC5Q9BVH7 336 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 RNF167Q9H6Y7 350 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 SSR3Q9UNL2 185 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 NUBP2Q9Y5Y2 271 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 NOTOA8MTQ0 251 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 LINC01619G3V211 115 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 OVOL1O14753 267 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 ARPC1BO15143 372 aaKnown RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 MRPS14O60783 128 aaKnown RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 RAMP3O60896 148 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 SAP30O75446 220 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 CRYZL1O95825 349 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 FCER2P06734 321 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 LGALS1P09382 135 aaKnown RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 CLEC2LP0C7M8 214 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 CD40LGP29965 261 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 GNG2P59768 71 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 TAGLNQ01995 201 aaKnown RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 CBX3Q13185 183 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 RTL8BQ17RB0 113 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 CDNFQ49AH0 187 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 OR2B11Q5JQS5 317 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 VAX1Q5SQQ9 334 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 ZNF773Q6PK81 442 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 IDO2Q6ZQW0 420 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 TCTEX1D1Q8N7M0 179 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 FCGR1BQ92637 280 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 DLX4Q92988 240 aaPredicted RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 RNF5Q99942 180 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 TOLLIPQ9H0E2 274 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 ZMAT5Q9UDW3 170 aaKnown RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 SCOCQ9UIL1 159 aa6.71□□□□□ -1.34
RFX3-209ENST00000451859 ZNF256Q9Y2P7 627 aaPredicted RBP6.71□□□□□ -1.34
RFX3-209ENST00000451859 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 GHRHP01286 108 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 IGLV2-23P01705 113 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 GALP22466 123 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 NFYAP23511 347 aaPredicted RBP6.7□□□□□ -1.34
RFX3-209ENST00000451859 FGF9P31371 208 aaPredicted RBP6.7□□□□□ -1.34
RFX3-209ENST00000451859 SDC2P34741 201 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 CRIP2P52943 208 aaPredicted RBP6.7□□□□□ -1.34
RFX3-209ENST00000451859 SSBP2P81877 361 aaPredicted RBP6.7□□□□□ -1.34
RFX3-209ENST00000451859 RUNX1Q01196 453 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 DCTN2Q13561 401 aaKnown RBP6.7□□□□□ -1.34
RFX3-209ENST00000451859 TNXAQ16473 311 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 AKIRIN2Q53H80 203 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 IDNKQ5T6J7 187 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 PYHIN1Q6K0P9 492 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 SFXN4Q6P4A7 337 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 ZNF562Q6V9R5 426 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 HAPLN4Q86UW8 402 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 H1FOOQ8IZA3 346 aaPredicted RBP6.7□□□□□ -1.34
RFX3-209ENST00000451859 ACOT12Q8WYK0 555 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 PHB2Q99623 299 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 ASCL2Q99929 193 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 B9D2Q9BPU9 175 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 DCUN1D5Q9BTE7 237 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 RHBDL2Q9NX52 303 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 COA4Q9NYJ1 87 aa6.7□□□□□ -1.34
RFX3-209ENST00000451859 HUWE1Q7Z6Z7 4374 aaKnown RBP6.69□□□□□ -1.34
RFX3-209ENST00000451859 C13orf42A0A1B0GVH6 325 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 SRRM4A7MD48 611 aaKnown RBP6.69□□□□□ -1.34
RFX3-209ENST00000451859 LINC00473A8K010 186 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 MPPED1O15442 326 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 FCGR3BO75015 233 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 TUSC2O75896 110 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 PTHLHP12272 177 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 CD36P16671 472 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 DTYMKP23919 212 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 DUTP33316 252 aaKnown RBP6.69□□□□□ -1.34
RFX3-209ENST00000451859 PITPNAQ00169 270 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 ARL6IP1Q15041 203 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 TMEM177Q53S58 311 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 HACD4Q5VWC8 232 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 TPRA1Q86W33 373 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 POC5Q8NA72 575 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 OR5H6Q8NGV6 325 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 CENPOQ9BU64 300 aa6.69□□□□□ -1.34
RFX3-209ENST00000451859 RSRP1Q9BUV0 290 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms