RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TMEM177Q53S58 311 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 VAX1Q5SQQ9 334 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 NUDCD2Q8WVJ2 157 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 PRR25Q96S07 402 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 B9D2Q9BPU9 175 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 SCOCQ9UIL1 159 aa11.83□□□□□ -0.52
CHD3-205ENST00000449744 IGHV4OR15-8A0A075B7B6 117 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 A0A087WW49 117 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 ARPC1BO15143 372 aaKnown RBP11.82□□□□□ -0.52
CHD3-205ENST00000449744 LY86O95711 162 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 CLEC2LP0C7M8 214 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 CD36P16671 472 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
CHD3-205ENST00000449744 SLURP1P55000 103 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 IDNKQ5T6J7 187 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 ZNF429Q86V71 674 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 POC5Q8NA72 575 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 TMEM68Q96MH6 324 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 RHBDL2Q9NX52 303 aa11.82□□□□□ -0.52
CHD3-205ENST00000449744 ZNF256Q9Y2P7 627 aaPredicted RBP11.82□□□□□ -0.52
CHD3-205ENST00000449744 DNAH3Q8TD57 4116 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 H3BUA1 57 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 SAP30O75446 220 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 CRYZL1O95825 349 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 HSPB1P04792 205 aaKnown RBP11.81□□□□□ -0.52
CHD3-205ENST00000449744 CRYGBP07316 175 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 NFYAP23511 347 aaPredicted RBP11.81□□□□□ -0.52
CHD3-205ENST00000449744 SCAND1P57086 179 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 PJVKQ0ZLH3 352 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 KCTD21Q4G0X4 260 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 CNIH2Q6PI25 160 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 ZNF645Q8N7E2 425 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 OR5T1Q8NG75 326 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 DLX4Q92988 240 aaPredicted RBP11.81□□□□□ -0.52
CHD3-205ENST00000449744 RHOVQ96L33 236 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 PHB2Q99623 299 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 DCUN1D5Q9BTE7 237 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 RNF167Q9H6Y7 350 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 OR2W1Q9Y3N9 320 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 ETV7Q9Y603 341 aa11.81□□□□□ -0.52
CHD3-205ENST00000449744 A0A0G2JLM5 398 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 C13orf42A0A1B0GVH6 325 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
CHD3-205ENST00000449744 LINC00473A8K010 186 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 TUSC2O75896 110 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 SLC22A5O76082 557 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 UBE2KP61086 200 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 C11orf87Q6NUJ2 197 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
CHD3-205ENST00000449744 DDB2Q92466 427 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 ANXA10Q9UJ72 324 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
CHD3-205ENST00000449744 TRAV18A0A075B6X5 111 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 SSX5O60225 188 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 HLA-DQB1P01920 261 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
CHD3-205ENST00000449744 TNXAQ16473 311 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 TIMM50Q3ZCQ8 353 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 KCTD9Q7L273 389 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 OR5H6Q8NGV6 325 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 OR4C12Q96R67 309 aa11.79□□□□□ -0.52
CHD3-205ENST00000449744 RANGRFQ9HD47 186 aaPredicted RBP11.79□□□□□ -0.52
CHD3-205ENST00000449744 MRPS7Q9Y2R9 242 aaKnown RBP11.79□□□□□ -0.52
CHD3-205ENST00000449744 RBMX2Q9Y388 322 aaKnown RBP11.79□□□□□ -0.52
CHD3-205ENST00000449744 LSM4Q9Y4Z0 139 aaKnown RBP11.79□□□□□ -0.52
CHD3-205ENST00000449744 MPPED1O15442 326 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 CREBL2O60519 120 aaPredicted RBP11.78□□□□□ -0.52
CHD3-205ENST00000449744 FCGR3BO75015 233 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 ACTL6BO94805 426 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 ARPC4P59998 168 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 DIABLOQ9NR28 239 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
CHD3-205ENST00000449744 A0A0A6YYH2 397 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 MSGN1A6NI15 193 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 A6NJ64 397 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 TMEM127O75204 238 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 ZP3P21754 424 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 AADACP22760 399 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 PRSS8Q16651 343 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 OR2B11Q5JQS5 317 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 ACSM6Q6P461 480 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 IDO2Q6ZQW0 420 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 BEST4Q8NFU0 473 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 OR6Q1Q8NGQ2 317 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 SRSF12Q8WXF0 261 aaKnown RBP11.77□□□□□ -0.53
CHD3-205ENST00000449744 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
CHD3-205ENST00000449744 TINAGL1Q9GZM7 467 aaPredicted RBP11.77□□□□□ -0.53
CHD3-205ENST00000449744 IGKV1D-13A0A0B4J2D9 117 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 ANKRD34BA5PLL1 514 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
CHD3-205ENST00000449744 SAA1P0DJI8 122 aaPredicted RBP11.76□□□□□ -0.53
CHD3-205ENST00000449744 APELAP0DMC3 54 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 IGKV1-13P0DP09 117 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 CDK10Q15131 360 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 CROCCP3Q8IVE0 287 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms