RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 J3QRK9 145 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 RRASP10301 218 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 NCS1P62166 190 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 TMEM267Q0VDI3 215 aaPredicted RBP10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 TCTEX1D1Q8N7M0 179 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 SNAPC3Q92966 411 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 KCTD12Q96CX2 325 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 S100A16Q96FQ6 103 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 FAM103A1Q9BTL3 118 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 ANAPC10Q9UM13 185 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 VSIG4Q9Y279 399 aa10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 RBM7Q9Y580 266 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-204ENST00000449062 SLC22A5O76082 557 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 VBP1P61758 197 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 FXYD3Q14802 87 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 PLGLAQ15195 96 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 CTF1Q16619 201 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 ECSCRQ19T08 205 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 UBE2NLQ5JXB2 153 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 TMEM65Q6PI78 240 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 OVCH2Q7RTZ1 564 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 SAMD12Q8N8I0 201 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 TEX45Q8NA69 505 aa10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 NAA50Q9GZZ1 169 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 FOXA2Q9Y261 457 aaPredicted RBP10.91□□□□□ -0.66
RTFDC1-204ENST00000449062 NAT1P18440 290 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 UBE2KP61086 200 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 GNB1P62873 340 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 RTL8BQ17RB0 113 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 ACTBL2Q562R1 376 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 UNQ5815/PRO19632Q6UWF5 114 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 ANKRD13BQ86YJ7 626 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 OSR1Q8TAX0 266 aaPredicted RBP10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 CASTOR1Q8WTX7 329 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 GIMAP1Q8WWP7 306 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 ARPC1AQ92747 370 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 RHOVQ96L33 236 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 HARBI1Q96MB7 349 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 MCRIP2Q9BUT9 160 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 A3GALT2U3KPV4 340 aa10.9□□□□□ -0.66
RTFDC1-204ENST00000449062 DNAH9Q9NYC9 4486 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 A0A1W2PN81 502 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 K7EIL1 84 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 SHOXO15266 292 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 BRI3O95415 125 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 CRYZL1O95825 349 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 AADACP22760 399 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 FCGR2CP31995 323 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 CHRNA7P36544 502 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 CBX5P45973 191 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 ALDH3B2P48448 385 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 TAS2R20P59543 309 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 MSMO1Q15800 293 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 PRSS8Q16651 343 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 DHRS11Q6UWP2 260 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 LYSMD2Q8IV50 215 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 OR5AP2Q8NGF4 316 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 OR5M8Q8NGP6 311 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 OR1N2Q8NGR9 330 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 CMTM3Q96MX0 182 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 CCL28Q9NRJ3 127 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 SCOCQ9UIL1 159 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 SORL1Q92673 2214 aa10.89□□□□□ -0.67
RTFDC1-204ENST00000449062 WI2-2373I1.2A0A1W2PRP0 233 aa10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 GABARAPO95166 117 aa10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 EIF4EP06730 217 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 FCER2P06734 321 aa10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 TMEM68Q96MH6 324 aa10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 OR5B12Q96R08 314 aa10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 GPHA2Q96T91 129 aa10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 HSD17B10Q99714 261 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 ALX4Q9H161 411 aaPredicted RBP10.88□□□□□ -0.67
RTFDC1-204ENST00000449062 COL7A1Q02388 2944 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 MEIS3P1A6NDR6 274 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 FCGR3BO75015 233 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 CNIH1O95406 144 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 PPYP01298 95 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 APOA1P02647 267 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 ARPC4P59998 168 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 ZNF616Q08AN1 781 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 TMEM69Q5SWH9 247 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 PYHIN1Q6K0P9 492 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 ZNF66Q6ZN08 573 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 IDO2Q6ZQW0 420 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 OR5T1Q8NG75 326 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 GPX8Q8TED1 209 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 MS4A10Q96PG2 267 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 GPR61Q9BZJ8 451 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 COMMD3Q9UBI1 195 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 PRELID3BQ9Y3B1 194 aa10.87□□□□□ -0.67
RTFDC1-204ENST00000449062 MSGN1A6NI15 193 aa10.86□□□□□ -0.67
RTFDC1-204ENST00000449062 RBMXL2O75526 392 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-204ENST00000449062 LGALS1P09382 135 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-204ENST00000449062 SAA1P0DJI8 122 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms