RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 C11orf88Q6PI97 169 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 CFHR4Q92496 578 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 SEC22CQ9BRL7 303 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 FAM212BQ9NTI7 297 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-203ENST00000449049 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 PRELID3BQ9Y3B1 194 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 C7orf66A4D0T2 115 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 H0YJW9 148 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 IFNA2P01563 188 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 LAMTOR1Q6IAA8 161 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 OR52B4Q8NGK2 314 aa11.33□□□□□ -0.6
SHMT2-203ENST00000449049 TIMM23O14925 209 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.65e-15■■■■■ 33.3
SHMT2-203ENST00000449049 ANXA3P12429 323 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 UCP1P25874 307 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 PAX6P26367 422 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 KIR2DS2P43631 304 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 TMEM187Q14656 261 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 SP6Q3SY56 376 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 ZNF431Q8TF32 576 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-203ENST00000449049 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 TMEM222Q9H0R3 208 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 GPN1Q9HCN4 374 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-203ENST00000449049 ALG5Q9Y673 324 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 APOA2P02652 100 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 RRASP10301 218 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 MC5RP33032 325 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 OR2B11Q5JQS5 317 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 PDPNQ86YL7 162 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 SPAG16Q8N0X2 631 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 CD300LFQ8TDQ1 290 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 MS4A7Q9GZW8 240 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-203ENST00000449049 SLC35D1Q9NTN3 355 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-203ENST00000449049 WNK2Q9Y3S1 2297 aa11.32□□□□□ -0.6
SHMT2-203ENST00000449049 A0A0A6YYJ9 748 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 RAMP3O60896 148 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 FCGR3BO75015 233 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 DUS4LO95620 317 aaKnown RBP11.31□□□□□ -0.6
SHMT2-203ENST00000449049 CD1BP29016 333 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 CLEC9AQ6UXN8 241 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 MITD1Q8WV92 249 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 WASHC3Q9Y3C0 194 aa11.31□□□□□ -0.6
SHMT2-203ENST00000449049 CREBL2O60519 120 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-203ENST00000449049 FBP1P09467 338 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 HNF1AP20823 631 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 RAB13P51153 203 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 DYNLT3P51808 116 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 RTL8BQ17RB0 113 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 ANKRD55Q3KP44 614 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-203ENST00000449049 LIAT1Q6ZQX7 453 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-203ENST00000449049 OR4S2Q8NH73 311 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 CASTOR1Q8WTX7 329 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 PRR13Q9NZ81 148 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 CREBBPQ92793 2442 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 FLNAP21333 2647 aaKnown RBP11.3□□□□□ -0.6
SHMT2-203ENST00000449049 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-203ENST00000449049 FLNBO75369 2602 aaKnown RBP11.3□□□□□ -0.6
SHMT2-203ENST00000449049 ABCA1O95477 2261 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 FAM90A9PA6NNJ1 464 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 CDS2O95674 445 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 SERPINE2P07093 398 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 RPA2P15927 270 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 SRPXP78539 464 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 LRTM2Q8N967 370 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 LHFPL5Q8TAF8 219 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 HSPB11Q9Y547 144 aa11.3□□□□□ -0.6
SHMT2-203ENST00000449049 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 VENTXO95231 258 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 HPRT1P00492 218 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 IGKV1-16P04430 117 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 BRS3P32247 399 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 LPAR6P43657 344 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-203ENST00000449049 TUSC1Q2TAM9 212 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 COQ8AQ8NI60 647 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 IL22RA2Q969J5 263 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 HYLS1Q96M11 299 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 H7C2Y5 167 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms