RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 RPL30P62888 115 aaKnown RBP6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 ASAH1Q13510 395 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 HNF4GQ14541 408 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 PHLDA2Q53GA4 152 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 FBLN7Q53RD9 439 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 ZNF66Q6ZN08 573 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 MRPL41Q8IXM3 137 aaKnown RBP6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 OR2T10Q8NGZ9 312 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 DDB2Q92466 427 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 RBMXL1Q96E39 390 aaKnown RBP6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 ZNF486Q96H40 463 aaPredicted RBP6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 RITA1Q96K30 269 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 SCGB3A2Q96PL1 93 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 DUX5Q96PT3 197 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 JMJD8Q96S16 334 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 SLC25A21Q9BQT8 299 aaPredicted RBP6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 RTBDNQ9BSG5 229 aaPredicted RBP6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 TNFRSF19Q9NS68 423 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 TBC1D24Q9ULP9 559 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 TCF19Q9Y242 345 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 WASHC3Q9Y3C0 194 aa6.04□□□□□ -1.44
AC004540.1-206ENST00000448056 H7C2Y5 167 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 NDUFB6O95139 128 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 APOA2P02652 100 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 IGKV1-16P04430 117 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 CTSDP07339 412 aaPredicted RBP6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 RRASP10301 218 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 TMEM11P17152 192 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 S100GP29377 79 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 SLC6A1P30531 599 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 F2RL1P55085 397 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 PIGPP57054 158 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 RND3P61587 244 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 HES1Q14469 280 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 LY6EQ16553 131 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 ABCA11PQ4W5N1 156 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 MZT2BQ6NZ67 158 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 C16orf87Q6PH81 154 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 TBC1D26Q86UD7 250 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 PDPNQ86YL7 162 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 Q8N6K4 173 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 TCTEX1D2Q8WW35 142 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 FLYWCH2Q96CP2 140 aaKnown RBP6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 RBM14Q96PK6 669 aaKnown RBP6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 RNF5Q99942 180 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 CHIAQ9BZP6 476 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 C5orf66Q9H5L9 145 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 SLC2A9Q9NRM0 540 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 PLSCR3Q9NRY6 295 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 SLC35D1Q9NTN3 355 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 PITPNC1Q9UKF7 332 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 VPREB3Q9UKI3 123 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 C14orf166Q9Y224 244 aaKnown RBP6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 VSIG4Q9Y279 399 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 PRELID3BQ9Y3B1 194 aa6.03□□□□□ -1.44
AC004540.1-206ENST00000448056 SRRM4A7MD48 611 aaKnown RBP6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 RNF212BA8MTL3 300 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 FCGR3BO75015 233 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 OR2F2O95006 317 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 RLN1P04808 185 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 RNASE1P07998 156 aaKnown RBP6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 F2RP25116 425 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 DEFA1P59665 94 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 DEFA3P59666 94 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 RPS16P62249 146 aaKnown RBP6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 UBA52P62987 128 aaKnown RBP6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 CATR1Q13166 79 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 RBMS2Q15434 407 aaKnown RBP6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 RTL8BQ17RB0 113 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 OR2B11Q5JQS5 317 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 KCTD9Q7L273 389 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 PRIMA1Q86XR5 153 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 SPAG16Q8N0X2 631 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 ADAD2Q8NCV1 583 aaKnown RBP6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 OR8H1Q8NGG4 311 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 OR4C13Q8NGP0 309 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 OR51H1Q8NH63 302 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 CD300LFQ8TDQ1 290 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 COPZ2Q9P299 210 aa6.02□□□□□ -1.45
AC004540.1-206ENST00000448056 JMJD1CQ15652 2540 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 TEX13DA0A0J9YY54 714 aaPredicted RBP6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 C3orf85A0A1B0GTC6 90 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 FAM240BA0A1B0GVZ2 78 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 NCBP2LA6PVI3 153 aaKnown RBP6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 TRIM77I1YAP6 450 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 RBFOX2O43251 390 aaKnown RBP eCLIP6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 CHST1O43916 411 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 GPR137BO60478 399 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 RAMP3O60896 148 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 PEX14O75381 377 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 CRYZL1O95825 349 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 TCRBP04435 133 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 AMY1AP04745 511 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 VSIG10L2P0DP72 767 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 AKR1C4P17516 323 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 CNTFRP26992 372 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 KIR2DS2P43631 304 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 LGALS7P47929 136 aa6.01□□□□□ -1.45
AC004540.1-206ENST00000448056 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms