RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 MLNRO43193 412 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 ZNF737O75373 536 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 GYPAP02724 150 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 GLI4P10075 376 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 ZNF823P16415 610 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 PGCP20142 388 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 GNRHRP30968 328 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 CDKN1AP38936 164 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 GABRA2P47869 451 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 RUNX1Q01196 453 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 SGCBQ16585 318 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 SNAI3Q3KNW1 292 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.05□□□□□ -0.64
DDX56-206ENST00000446987 TMEM217Q8N7C4 229 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 OR51T1Q8NGJ9 327 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 ITLN2Q8WWU7 325 aaPredicted RBP11.05□□□□□ -0.64
DDX56-206ENST00000446987 PARLQ9H300 379 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 INTS1Q8N201 2190 aaKnown RBP11.05□□□□□ -0.64
DDX56-206ENST00000446987 USP9YO00507 2555 aaPredicted RBP11.05□□□□□ -0.64
DDX56-206ENST00000446987 PTPN13Q12923 2485 aa11.05□□□□□ -0.64
DDX56-206ENST00000446987 SPTAN1Q13813 2472 aaKnown RBP11.05□□□□□ -0.64
DDX56-206ENST00000446987 A0A0J9YW62 118 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 A0A0U1RQK1 487 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 ZNF320A2RRD8 509 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 ZNF814B7Z6K7 855 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 NRASP01111 189 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 KRASP01116 189 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 SLC6A8P48029 635 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 PSMB3P49720 205 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 ASCL1P50553 236 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 LINC00310P59036 64 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 SRYQ05066 204 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 VAMP3Q15836 100 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 C17orf78Q8N4C9 275 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 OR4S2Q8NH73 311 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 TMEM234Q8WY98 164 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 SPSB1Q96BD6 273 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 UCN2Q96RP3 112 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 MRPL13Q9BYD1 178 aaKnown RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 PBOV1Q9GZY1 135 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 TMPRSS2O15393 492 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 CTLA4P16410 223 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 BLVRBP30043 206 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 OTX1P32242 354 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 SP6Q3SY56 376 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 FAM71F2Q6NXP2 309 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 KLHL24Q6TFL4 600 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 MCEMP1Q8IX19 187 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 C9orf106Q8NAJ2 232 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 BCL2L2Q92843 193 aaPredicted RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 BANF2Q9H503 90 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 TUBG2Q9NRH3 451 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 SMPXQ9UHP9 88 aa11.04□□□□□ -0.64
DDX56-206ENST00000446987 SPTBN1Q01082 2364 aaKnown RBP11.04□□□□□ -0.64
DDX56-206ENST00000446987 ICE1Q9Y2F5 2266 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 TRAV36DV7A0A075B6V5 113 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 CORTO00230 105 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 ZNF253O75346 499 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 AGFG2O95081 481 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 CRISP2P16562 243 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 CCL1P22362 96 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 ADMP35318 185 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 OR3A4PP47883 348 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 FMODQ06828 376 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 NIT1Q86X76 327 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 MUC15Q8N387 334 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 SIGLECL1Q8N7X8 197 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 ZNF286AQ9HBT8 521 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 ALKBH4Q9NXW9 302 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 PPIAL4AQ9Y536 164 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
DDX56-206ENST00000446987 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 A0A0G2JNJ9 132 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 NKX2-6A6NCS4 301 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 TNFSF11O14788 317 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 NPIPB7O75200 414 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 SERF1AO75920 110 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 GPX1P07203 203 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 RNPS1Q15287 305 aaKnown RBP11.02□□□□□ -0.64
DDX56-206ENST00000446987 ACKR1Q16570 336 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 OR10D3Q8NH80 312 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 MRPL30Q8TCC3 161 aaKnown RBP11.02□□□□□ -0.64
DDX56-206ENST00000446987 ABHD3Q8WU67 409 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 OR5P3Q8WZ94 311 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 REEP6Q96HR9 211 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 TRIB1Q96RU8 372 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 PATZ1Q9HBE1 687 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms