RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RAXQ9Y2V3 346 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 PMCHP20382 165 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 FXYD3Q14802 87 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 AANATQ16613 207 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 SLC16A13Q7RTY0 426 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 CLRN3Q8NCR9 226 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 MRPL24Q96A35 216 aaKnown RBP7.31□□□□□ -1.24
PTPN3-204ENST00000446349 CYB5R3P00387 301 aaPredicted RBP7.31□□□□□ -1.24
PTPN3-204ENST00000446349 REG1BP48304 166 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 TMEM177Q53S58 311 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 PSMG4Q5JS54 123 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 TMEM70Q9BUB7 260 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 TMEM140Q9NV12 185 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 FRMPD3Q5JV73 1810 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 SPRED2Q7Z698 418 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 ANGPTL6Q8NI99 470 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 RNASEH2CQ8TDP1 164 aaKnown RBP7.31□□□□□ -1.24
PTPN3-204ENST00000446349 Q96M66 194 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 C1QTNF5Q9BXJ0 243 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 TRBV5-7A0A0A0MS05 114 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 HTN1P15515 57 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 PAX1P15863 534 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 ACP7Q6ZNF0 438 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 WDYHV1Q96HA8 205 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 PLXNA3P51805 1871 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 OOSP1A8MZH6 123 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 LEMD1Q68G75 181 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 YAE1D1Q9NRH1 226 aa7.31□□□□□ -1.24
PTPN3-204ENST00000446349 M0R2Z0 102 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 SCGB1D4Q6XE38 83 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 RELL2Q8NC24 303 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-204ENST00000446349 FREM3P0C091 2139 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 RNF151Q2KHN1 245 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 UNQ6494/PRO21346Q6UXR6 183 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 DTX2Q86UW9 622 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 MS4A3Q96HJ5 214 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 IGKV3-7A0A075B6H7 116 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 IGHV2OR16-5A0A0B4J2B6 119 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 CAMPP49913 170 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 MGAT2Q10469 447 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 PNKDQ8N490 385 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 GATAD1Q8WUU5 269 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 SMIM8Q96KF7 97 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 VPS25Q9BRG1 176 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 ATG101Q9BSB4 218 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 COL25A1Q9BXS0 654 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-204ENST00000446349 C7orf69Q9H7B7 122 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 SLC25A17O43808 307 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 KBTBD11O94819 623 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 TRGV3P03979 118 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 CECR9P0C854 216 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 PRNTQ86SH4 94 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 CLDND2Q8NHS1 167 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 CACNG8Q8WXS5 425 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 CEP250Q9BV73 2442 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 MARCH11A6NNE9 402 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 C8orf88P0DMB2 117 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 VDAC2P45880 294 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-204ENST00000446349 HERPUD1Q15011 391 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 AQP3Q92482 292 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 SPTBN1Q01082 2364 aaKnown RBP7.3□□□□□ -1.24
PTPN3-204ENST00000446349 TP53BP1Q12888 1972 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-204ENST00000446349 TCF20Q9UGU0 1960 aaKnown RBP7.3□□□□□ -1.24
PTPN3-204ENST00000446349 ERVS71-1P61550 626 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 MESP2Q0VG99 397 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 TWIST1Q15672 202 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 ST6GALNAC3Q8NDV1 305 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 SIGLEC12Q96PQ1 595 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 LPAR5Q9H1C0 372 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 MOSP00540 346 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 APCSP02743 223 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 FAM159AQ6UWV7 190 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 LYZL2Q7Z4W2 148 aa7.3□□□□□ -1.24
PTPN3-204ENST00000446349 RHBDL1O75783 438 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 LBHQ53QV2 105 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-204ENST00000446349 DHRS11Q6UWP2 260 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 WDFY1Q8IWB7 410 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 PLSCR3Q9NRY6 295 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 SIRT4Q9Y6E7 314 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-204ENST00000446349 EFEMP2O95967 443 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TCF24Q7RTU0 167 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 SPOCK3Q9BQ16 436 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TANC1Q9C0D5 1861 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TGFAP01135 160 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 CD59P13987 128 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 CYB5R2Q6BCY4 276 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 FGFRL1Q8N441 504 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 RCC2Q9P258 522 aaKnown RBP7.29□□□□□ -1.24
PTPN3-204ENST00000446349 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.29□□□□□ -1.24
PTPN3-204ENST00000446349 THY1P04216 161 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 GATA3P23771 443 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TNFRSF9Q07011 255 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 SNAI3Q3KNW1 292 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 HSPB7Q9UBY9 170 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 ZFP30Q9Y2G7 519 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 ZIC3O60481 467 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 COX6CP09669 75 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms