RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SULT1A1P50225 295 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 SPCS3P61009 180 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 UBE2KP61086 200 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 AKR1C8PQ5T2L2 129 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 ATP5SQ99766 215 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 RBKSQ9H477 322 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 VSIRQ9H7M9 311 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 DYSFO75923 2080 aa13.97□□□□□ -0.17
LAPTM4B-201ENST00000445593 RNF212BA8MTL3 300 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 ZG16O60844 167 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 RAB2AP61019 212 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 COTL1Q14019 142 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 TMPRSS2O15393 492 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 IFNA5P01569 189 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 S100A8P05109 93 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 SNRPCP09234 159 aaKnown RBP13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 DVL1P1P54792 670 aaPredicted RBP13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 FGF8P55075 233 aaPredicted RBP13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 H2BFWTQ7Z2G1 175 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 DCHS2Q6V1P9 2916 aa13.96□□□□□ -0.17
LAPTM4B-201ENST00000445593 HCFC1P51610 2035 aa13.96□□□□□ -0.18
LAPTM4B-201ENST00000445593 M0R036 132 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 MGST3O14880 152 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 YIF1AO95070 293 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 SNRNP70P08621 437 aaKnown RBP13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 TAS2R60P59551 318 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 C14orf79Q96F83 325 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 RAB40CQ96S21 281 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 RNF7Q9UBF6 113 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 K7N7A8 449 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 PROP1O75360 226 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 LCN15Q6UWW0 184 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 CCL17Q92583 94 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 LSM10Q969L4 123 aaKnown RBP13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 ISOC2Q96AB3 205 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 AGMATQ9BSE5 352 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 GGACTQ9BVM4 153 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 CEBPZOSA8MTT3 80 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 H2AFB1P0C5Y9 115 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 TUBG1P23258 451 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 HABP2Q14520 560 aaPredicted RBP13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 SNX22Q96L94 193 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 TUBG2Q9NRH3 451 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 CALYQ9NYX4 217 aa13.95□□□□□ -0.18
LAPTM4B-201ENST00000445593 IGLV3-9A0A075B6K5 115 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 CD5P06127 495 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 TNFRSF9Q07011 255 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 FAM169BQ8N8A8 192 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 PPP1R35Q8TAP8 253 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 SCGB1C1Q8TD33 95 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 SEC11CQ9BY50 192 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 MMP24Q9Y5R2 645 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 PIEZO1Q92508 2521 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 GFRA3O60609 400 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 MMP23AO75900 390 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 THBDP07204 575 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 DEFA4P12838 97 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 RPS23P62266 143 aaKnown RBP13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 MORN2Q502X0 79 aa13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 C1orf229Q6ZS94 237 aaPredicted RBP13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 ASH1LQ9NR48 2969 aaKnown RBP13.94□□□□□ -0.18
LAPTM4B-201ENST00000445593 MARCH11A6NNE9 402 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 FAM90A27PA6NNH2 459 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 IFNA17P01571 189 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 TMEM11P17152 192 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 BAXQ07812 192 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 WSB1Q9Y6I7 421 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 K7ENP7 123 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 IRF2P14316 349 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 WFIKKN1Q96NZ8 548 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 RPS10P5Q9NQ39 176 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 ADIPOQQ15848 244 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 MRGPRGQ86SM5 289 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 LYG1Q8N1E2 194 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 OR4C12Q96R67 309 aa13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 PUS1Q9Y606 427 aaKnown RBP eCLIP13.93□□□□□ -0.18
LAPTM4B-201ENST00000445593 A0A087X0M5 115 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 A0A1B0GX30 115 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 TNFSF4P23510 183 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 PRB3Q04118 309 aaPredicted RBP13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 NUDT19A8MXV4 375 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 OR9G9P0C7N8 305 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 GZMHP20718 246 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 SLC38A11Q08AI6 406 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 PRAMEF5Q5TYX0 476 aa13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 CARHSP1Q9Y2V2 147 aaKnown RBP13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 STRAPQ9Y3F4 350 aaKnown RBP13.92□□□□□ -0.18
LAPTM4B-201ENST00000445593 TRAV3A0A0B4J244 114 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 LRRC30A6NM36 301 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 OPN1MWP04001 364 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 OPN1MW2P0DN77 364 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 OPN1MW3P0DN78 364 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 MSMO1Q15800 293 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 HINT2Q9BX68 163 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 SVEP1Q4LDE5 3571 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 ZFP92A6NM28 416 aa13.91□□□□□ -0.18
LAPTM4B-201ENST00000445593 UMAD1C9J7I0 102 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms