RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 APOA2P02652 100 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 CRYGBP07316 175 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 CBX5P45973 191 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 RORCP51449 518 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 SLURP1P55000 103 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 VBP1P61758 197 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 RPS16P62249 146 aaKnown RBP8.41□□□□□ -1.06
SF3A1-203ENST00000444440 DEFA5Q01523 94 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 CBX3Q13185 183 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 GPR141Q7Z602 305 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 PPP1R27Q86WC6 154 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 SAMD12Q8N8I0 201 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 LFNGQ8NES3 379 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 OR5M8Q8NGP6 311 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 DDB2Q92466 427 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 DCUN1D4Q92564 292 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 SLC25A38Q96DW6 304 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 CMTM3Q96MX0 182 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 PRR25Q96S07 402 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
SF3A1-203ENST00000444440 AUNIPQ9H7T9 357 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
SF3A1-203ENST00000444440 VSIG4Q9Y279 399 aa8.41□□□□□ -1.06
SF3A1-203ENST00000444440 IGHV4OR15-8A0A075B7B6 117 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 A0A087WW49 117 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 IGKV1D-13A0A0B4J2D9 117 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 SEC14L6B5MCN3 397 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 J3QRK9 145 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 SPDEFO95238 335 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 IGLV2-14P01704 120 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 SMIM18P0DKX4 95 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 IGKV1-13P0DP09 117 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 ARPC4P59998 168 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 NCS1P62166 190 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF616Q08AN1 781 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 GPR107Q5VW38 600 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 MZT2AQ6P582 158 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 TMEM65Q6PI78 240 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 UNQ5815/PRO19632Q6UWF5 114 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 ZNF562Q6V9R5 426 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 BVESQ8NE79 360 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 OR1N2Q8NGR9 330 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 ABHD5Q8WTS1 349 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 DPF1Q92782 380 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 FLYWCH2Q96CP2 140 aaKnown RBP8.4□□□□□ -1.06
SF3A1-203ENST00000444440 ADTRPQ96IZ2 230 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 MS4A10Q96PG2 267 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
SF3A1-203ENST00000444440 ANXA10Q9UJ72 324 aa8.4□□□□□ -1.06
SF3A1-203ENST00000444440 RBMXL2O75526 392 aaKnown RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 IGHV3-11P01762 117 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 APOA1P02647 267 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 LGALS1P09382 135 aaKnown RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 RRASP10301 218 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 PTHLHP12272 177 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 NFYAP23511 347 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 DUTP33316 252 aaKnown RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 RPL30P62888 115 aaKnown RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 DGCR2P98153 550 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 FXYD3Q14802 87 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 AKIRIN2Q53H80 203 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 TMEM177Q53S58 311 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 TMEM69Q5SWH9 247 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 C9orf66Q5T8R8 295 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 HOGA1Q86XE5 327 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 GRPEL2Q8TAA5 225 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 AP3S1Q92572 193 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 ARPC1AQ92747 370 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 DLX4Q92988 240 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 HARBI1Q96MB7 349 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 GPR61Q9BZJ8 451 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 COMMD3Q9UBI1 195 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 OR2W1Q9Y3N9 320 aa8.39□□□□□ -1.07
SF3A1-203ENST00000444440 LSM4Q9Y4Z0 139 aaKnown RBP8.39□□□□□ -1.07
SF3A1-203ENST00000444440 GABARAPO95166 117 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 HLA-DQB1P01920 261 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 APELAP0DMC3 54 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 ZNF182P17025 639 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-203ENST00000444440 ECI1P42126 302 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 LGALS7P47929 136 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 ALDH3B2P48448 385 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 EIF4EBP1Q13541 118 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-203ENST00000444440 CTF1Q16619 201 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 RTL8BQ17RB0 113 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 ACTBL2Q562R1 376 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 GVQW1Q8N7I0 195 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 TCTEX1D1Q8N7M0 179 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 OR5T1Q8NG75 326 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 IFT46Q9NQC8 304 aa8.38□□□□□ -1.07
SF3A1-203ENST00000444440 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 SHOXO15266 292 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 CRYZL1O95825 349 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 PRSS3P35030 304 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 BRWD1-AS2P59051 145 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 TPPP2P59282 170 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms